Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PDX1P52945 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21■□□□□ 0.95
PDX1P52945 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDX1P52945 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21■□□□□ 0.95
PDX1P52945 AC010141.3-201ENST00000456659 717 ntBASIC21■□□□□ 0.95
PDX1P52945 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21■□□□□ 0.95
PDX1P52945 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21■□□□□ 0.95
PDX1P52945 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDX1P52945 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
PDX1P52945 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDX1P52945 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.99■□□□□ 0.95
PDX1P52945 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDX1P52945 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.99■□□□□ 0.95
PDX1P52945 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.99■□□□□ 0.95
PDX1P52945 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.99■□□□□ 0.95
PDX1P52945 BID-214ENST00000617586 542 ntTSL 5 BASIC20.99■□□□□ 0.95
PDX1P52945 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.99■□□□□ 0.95
PDX1P52945 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.99■□□□□ 0.95
PDX1P52945 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDX1P52945 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDX1P52945 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDX1P52945 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDX1P52945 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDX1P52945 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.99■□□□□ 0.95
PDX1P52945 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDX1P52945 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDX1P52945 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDX1P52945 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PDX1P52945 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDX1P52945 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDX1P52945 CROCCP5-201ENST00000436658 830 ntBASIC20.98■□□□□ 0.95
PDX1P52945 AC026185.1-201ENST00000445748 174 ntBASIC20.98■□□□□ 0.95
PDX1P52945 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.98■□□□□ 0.95
PDX1P52945 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.98■□□□□ 0.95
PDX1P52945 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDX1P52945 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PDX1P52945 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDX1P52945 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDX1P52945 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDX1P52945 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDX1P52945 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.97■□□□□ 0.95
PDX1P52945 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.97■□□□□ 0.95
PDX1P52945 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.97■□□□□ 0.95
PDX1P52945 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.97■□□□□ 0.95
PDX1P52945 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PDX1P52945 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.97■□□□□ 0.95
PDX1P52945 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.97■□□□□ 0.95
PDX1P52945 AC104771.1-201ENST00000603335 964 ntBASIC20.97■□□□□ 0.95
PDX1P52945 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PDX1P52945 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PDX1P52945 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 KRT19P1-201ENST00000405746 1186 ntBASIC20.96■□□□□ 0.95
PDX1P52945 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.96■□□□□ 0.95
PDX1P52945 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.96■□□□□ 0.95
PDX1P52945 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.96■□□□□ 0.95
PDX1P52945 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PDX1P52945 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.96■□□□□ 0.95
PDX1P52945 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDX1P52945 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDX1P52945 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDX1P52945 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.95■□□□□ 0.94
PDX1P52945 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDX1P52945 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDX1P52945 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.95■□□□□ 0.94
PDX1P52945 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.95■□□□□ 0.94
PDX1P52945 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDX1P52945 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDX1P52945 AC087239.1-201ENST00000622671 572 ntBASIC20.95■□□□□ 0.94
PDX1P52945 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.95■□□□□ 0.94
PDX1P52945 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.95■□□□□ 0.94
PDX1P52945 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.95■□□□□ 0.94
PDX1P52945 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDX1P52945 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDX1P52945 DUSP8P3-201ENST00000399571 1760 ntBASIC20.95■□□□□ 0.94
PDX1P52945 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.94■□□□□ 0.94
PDX1P52945 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PDX1P52945 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PDX1P52945 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.94■□□□□ 0.94
PDX1P52945 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.94■□□□□ 0.94
PDX1P52945 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDX1P52945 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.93■□□□□ 0.94
PDX1P52945 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDX1P52945 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.93■□□□□ 0.94
PDX1P52945 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDX1P52945 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDX1P52945 OXCT2P1-201ENST00000447263 1535 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms