Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCNKAP51800 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCNKAP51800 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.19■□□□□ 0.98
CLCNKAP51800 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.19■□□□□ 0.98
CLCNKAP51800 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.19■□□□□ 0.98
CLCNKAP51800 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.19■□□□□ 0.98
CLCNKAP51800 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLCNKAP51800 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCNKAP51800 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCNKAP51800 AC137767.1-201ENST00000602918 1920 ntBASIC21.18■□□□□ 0.98
CLCNKAP51800 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCNKAP51800 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CLCNKAP51800 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.18■□□□□ 0.98
CLCNKAP51800 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.18■□□□□ 0.98
CLCNKAP51800 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.18■□□□□ 0.98
CLCNKAP51800 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLCNKAP51800 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCNKAP51800 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCNKAP51800 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCNKAP51800 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCNKAP51800 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.18■□□□□ 0.98
CLCNKAP51800 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCNKAP51800 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCNKAP51800 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CLCNKAP51800 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLCNKAP51800 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLCNKAP51800 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
CLCNKAP51800 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.17■□□□□ 0.98
CLCNKAP51800 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.17■□□□□ 0.98
CLCNKAP51800 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 AC009237.3-201ENST00000393279 1427 ntBASIC21.17■□□□□ 0.98
CLCNKAP51800 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCNKAP51800 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.17■□□□□ 0.98
CLCNKAP51800 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.17■□□□□ 0.98
CLCNKAP51800 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLCNKAP51800 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLCNKAP51800 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCNKAP51800 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCNKAP51800 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLCNKAP51800 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCNKAP51800 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCNKAP51800 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCNKAP51800 KRT18P5-201ENST00000436075 1291 ntBASIC21.16■□□□□ 0.98
CLCNKAP51800 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLCNKAP51800 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLCNKAP51800 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLCNKAP51800 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCNKAP51800 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCNKAP51800 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCNKAP51800 ESRRAP2-201ENST00000418437 1549 ntBASIC21.15■□□□□ 0.98
CLCNKAP51800 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCNKAP51800 OR7E47P-201ENST00000546390 1422 ntBASIC21.15■□□□□ 0.98
CLCNKAP51800 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCNKAP51800 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCNKAP51800 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.15■□□□□ 0.98
CLCNKAP51800 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CLCNKAP51800 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCNKAP51800 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCNKAP51800 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCNKAP51800 LINC00526-201ENST00000581067 1875 ntBASIC21.15■□□□□ 0.98
CLCNKAP51800 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCNKAP51800 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCNKAP51800 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCNKAP51800 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.14■□□□□ 0.98
CLCNKAP51800 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.14■□□□□ 0.98
CLCNKAP51800 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.14■□□□□ 0.98
CLCNKAP51800 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.14■□□□□ 0.98
CLCNKAP51800 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCNKAP51800 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCNKAP51800 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLCNKAP51800 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CLCNKAP51800 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCNKAP51800 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.14■□□□□ 0.97
CLCNKAP51800 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.13■□□□□ 0.97
CLCNKAP51800 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCNKAP51800 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms