Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNFP41002 AL136116.3-201ENST00000402907 1138 ntBASIC21.71■■□□□ 1.07
CCNFP41002 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.71■■□□□ 1.07
CCNFP41002 AC099791.2-201ENST00000605725 427 ntBASIC21.71■■□□□ 1.07
CCNFP41002 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.71■■□□□ 1.07
CCNFP41002 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.71■■□□□ 1.07
CCNFP41002 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNFP41002 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNFP41002 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNFP41002 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNFP41002 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.7■■□□□ 1.07
CCNFP41002 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNFP41002 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.7■■□□□ 1.06
CCNFP41002 DUX4L19-201ENST00000557448 1267 ntBASIC21.7■■□□□ 1.06
CCNFP41002 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.7■■□□□ 1.06
CCNFP41002 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCNFP41002 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.7■■□□□ 1.06
CCNFP41002 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNFP41002 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNFP41002 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNFP41002 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNFP41002 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNFP41002 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNFP41002 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNFP41002 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNFP41002 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNFP41002 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNFP41002 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNFP41002 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.69■■□□□ 1.06
CCNFP41002 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNFP41002 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNFP41002 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNFP41002 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNFP41002 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCNFP41002 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNFP41002 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNFP41002 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNFP41002 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCNFP41002 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CCNFP41002 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNFP41002 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNFP41002 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNFP41002 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNFP41002 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.67■■□□□ 1.06
CCNFP41002 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCNFP41002 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNFP41002 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNFP41002 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNFP41002 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNFP41002 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 AC005229.4-201ENST00000610085 2198 ntBASIC21.66■■□□□ 1.06
CCNFP41002 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCNFP41002 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNFP41002 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.66■■□□□ 1.06
CCNFP41002 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNFP41002 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CCNFP41002 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CCNFP41002 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CCNFP41002 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNFP41002 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCNFP41002 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNFP41002 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNFP41002 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNFP41002 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.65■■□□□ 1.06
CCNFP41002 AL499627.2-201ENST00000606283 725 ntBASIC21.65■■□□□ 1.06
CCNFP41002 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNFP41002 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCNFP41002 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNFP41002 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNFP41002 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.65■■□□□ 1.06
CCNFP41002 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNFP41002 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CCNFP41002 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCNFP41002 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCNFP41002 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNFP41002 AC006455.2-201ENST00000429931 906 ntBASIC21.64■■□□□ 1.05
CCNFP41002 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.64■■□□□ 1.05
CCNFP41002 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.64■■□□□ 1.05
CCNFP41002 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.64■■□□□ 1.05
CCNFP41002 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCNFP41002 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCNFP41002 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNFP41002 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNFP41002 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNFP41002 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCNFP41002 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CCNFP41002 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNFP41002 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNFP41002 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNFP41002 SYT6-210ENST00000641643 1587 ntBASIC21.63■■□□□ 1.05
CCNFP41002 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNFP41002 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNFP41002 AL138724.1-201ENST00000606771 1088 ntBASIC21.63■■□□□ 1.05
CCNFP41002 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms