Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 ABM1YJR108W 372 nt4.97□□□□□ -1.61
PUB1P32588 YKL118WYKL118W 312 nt4.97□□□□□ -1.61
PUB1P32588 ACP1YKL192C 378 nt4.97□□□□□ -1.61
PUB1P32588 VPS51YKR020W 495 nt4.97□□□□□ -1.61
PUB1P32588 RAD33YML011C 534 nt4.97□□□□□ -1.61
PUB1P32588 AIM32YML050W 936 nt4.97□□□□□ -1.61
PUB1P32588 snR17asnR17a 333 nt4.97□□□□□ -1.61
PUB1P32588 ICY2YPL250C 411 nt4.97□□□□□ -1.61 RIP-Chip
PUB1P32588 MCM16YPR046W 546 nt4.97□□□□□ -1.61
PUB1P32588 NGR1YBR212W 2019 nt4.97□□□□□ -1.61 RIP-Chip
PUB1P32588 RCK2YLR248W 1833 nt4.97□□□□□ -1.61
PUB1P32588 GPT2YKR067W 2232 nt4.96□□□□□ -1.62 RIP-Chip
PUB1P32588 ASF2YDL197C 1578 nt4.96□□□□□ -1.62
PUB1P32588 GUF1YLR289W 1938 nt4.96□□□□□ -1.62
PUB1P32588 snR5snR5 204 nt4.96□□□□□ -1.62
PUB1P32588 YDL071CYDL071C 375 nt4.96□□□□□ -1.62
PUB1P32588 snR9snR9 187 nt4.96□□□□□ -1.62
PUB1P32588 VMA8YEL051W 771 nt4.96□□□□□ -1.62
PUB1P32588 YER119C-AYER119C-A 372 nt4.96□□□□□ -1.62
PUB1P32588 YGL039WYGL039W 1047 nt4.96□□□□□ -1.62
PUB1P32588 RPS0BYLR048W 759 nt4.96□□□□□ -1.62 RIP-Chip
PUB1P32588 YLR290CYLR290C 834 nt4.96□□□□□ -1.62 RIP-Chip
PUB1P32588 SEC17YBL050W 879 nt4.96□□□□□ -1.62
PUB1P32588 YNL181WYNL181W 1224 nt4.96□□□□□ -1.62 RIP-Chip
PUB1P32588 MRK1YDL079C 1506 nt4.96□□□□□ -1.62
PUB1P32588 SKN1YGR143W 2316 nt4.96□□□□□ -1.62 RIP-Chip
PUB1P32588 FOL1YNL256W 2475 nt4.96□□□□□ -1.62
PUB1P32588 HAP1YLR256W 4509 nt4.95□□□□□ -1.62
PUB1P32588 ARC1YGL105W 1131 nt4.95□□□□□ -1.62
PUB1P32588 YGR025WYGR025W 303 nt4.95□□□□□ -1.62 RIP-Chip
PUB1P32588 CDC12YHR107C 1224 nt4.95□□□□□ -1.62
PUB1P32588 YHR130CYHR130C 336 nt4.95□□□□□ -1.62 RIP-Chip
PUB1P32588 YKL066WYKL066W 444 nt4.95□□□□□ -1.62 RIP-Chip
PUB1P32588 YKL131WYKL131W 522 nt4.95□□□□□ -1.62
PUB1P32588 YKL177WYKL177W 339 nt4.95□□□□□ -1.62
PUB1P32588 YOR053WYOR053W 342 nt4.95□□□□□ -1.62
PUB1P32588 YOP1YPR028W 543 nt4.95□□□□□ -1.62
PUB1P32588 YHR214C-CYHR214C-C 1437 nt4.95□□□□□ -1.62
PUB1P32588 GZF3YJL110C 1656 nt4.95□□□□□ -1.62 RIP-Chip
PUB1P32588 THI22YPR121W 1719 nt4.94□□□□□ -1.62
PUB1P32588 MSN2YMR037C 2115 nt4.94□□□□□ -1.62 RIP-Chip
PUB1P32588 YFR006WYFR006W 1608 nt4.94□□□□□ -1.62
PUB1P32588 SLY41YOR307C 1362 nt4.94□□□□□ -1.62 RIP-Chip
PUB1P32588 YDR131CYDR131C 1671 nt4.94□□□□□ -1.62
PUB1P32588 YEL020CYEL020C 1683 nt4.94□□□□□ -1.62
PUB1P32588 RPL35BYDL136W 363 nt4.94□□□□□ -1.62 RIP-Chip
PUB1P32588 GPI19YDR437W 423 nt4.94□□□□□ -1.62 RIP-Chip
PUB1P32588 YEL057CYEL057C 702 nt4.94□□□□□ -1.62
PUB1P32588 PRE9YGR135W 777 nt4.94□□□□□ -1.62
PUB1P32588 YIL014C-AYIL014C-A 315 nt4.94□□□□□ -1.62
PUB1P32588 YVH1YIR026C 1095 nt4.94□□□□□ -1.62
PUB1P32588 YMR173W-AYMR173W-A 1185 nt4.94□□□□□ -1.62
PUB1P32588 LST8YNL006W 912 nt4.94□□□□□ -1.62
PUB1P32588 RRT16YNL105W 429 nt4.94□□□□□ -1.62
PUB1P32588 YNL198CYNL198C 303 nt4.94□□□□□ -1.62
PUB1P32588 ZPS1YOL154W 750 nt4.94□□□□□ -1.62
PUB1P32588 YBR285WYBR285W 435 nt4.94□□□□□ -1.62
PUB1P32588 SMF1YOL122C 1728 nt4.94□□□□□ -1.62
PUB1P32588 DUG1YFR044C 1446 nt4.93□□□□□ -1.62
PUB1P32588 LRP1YHR081W 555 nt4.93□□□□□ -1.62
PUB1P32588 MTC2YKL098W 1074 nt4.93□□□□□ -1.62
PUB1P32588 KTR2YKR061W 1278 nt4.93□□□□□ -1.62
PUB1P32588 APS1YLR170C 471 nt4.93□□□□□ -1.62
PUB1P32588 CGI121YML036W 546 nt4.93□□□□□ -1.62
PUB1P32588 YNL089CYNL089C 477 nt4.93□□□□□ -1.62
PUB1P32588 ATP11YNL315C 957 nt4.93□□□□□ -1.62
PUB1P32588 MSS18YPR134W 807 nt4.93□□□□□ -1.62
PUB1P32588 EKI1YDR147W 1605 nt4.93□□□□□ -1.62
PUB1P32588 UBP16YPL072W 1500 nt4.92□□□□□ -1.62
PUB1P32588 YDR149CYDR149C 708 nt4.92□□□□□ -1.62
PUB1P32588 MET32YDR253C 576 nt4.92□□□□□ -1.62
PUB1P32588 tM(CAU)Q1tM(CAU)Q1 76 nt4.92□□□□□ -1.62
PUB1P32588 YIP1YGR172C 747 nt4.92□□□□□ -1.62 RIP-Chip
PUB1P32588 YLR224WYLR224W 1110 nt4.92□□□□□ -1.62
PUB1P32588 SSP120YLR250W 705 nt4.92□□□□□ -1.62
PUB1P32588 YLR297WYLR297W 390 nt4.92□□□□□ -1.62 RIP-Chip
PUB1P32588 YPR195CYPR195C 330 nt4.92□□□□□ -1.62
PUB1P32588 ARL1YBR164C 552 nt4.92□□□□□ -1.62
PUB1P32588 ERV15YBR210W 429 nt4.92□□□□□ -1.62 RIP-Chip
PUB1P32588 HRP1YOL123W 1605 nt4.92□□□□□ -1.62
PUB1P32588 YRB30YGL164C 1323 nt4.92□□□□□ -1.62
PUB1P32588 PGS1YCL004W 1566 nt4.91□□□□□ -1.62
PUB1P32588 EMW1YNL313C 2715 nt4.91□□□□□ -1.62
PUB1P32588 MRH1YDR033W 963 nt4.91□□□□□ -1.62 RIP-Chip
PUB1P32588 ATP8Q0080 147 nt4.91□□□□□ -1.62 RIP-Chip
PUB1P32588 RMD6YEL072W 696 nt4.91□□□□□ -1.62
PUB1P32588 MAG1YER142C 891 nt4.91□□□□□ -1.62
PUB1P32588 FRA2YGL220W 363 nt4.91□□□□□ -1.62
PUB1P32588 YIL161WYIL161W 708 nt4.91□□□□□ -1.62
PUB1P32588 RHO4YKR055W 876 nt4.91□□□□□ -1.62
PUB1P32588 PGA3YML125C 939 nt4.91□□□□□ -1.62
PUB1P32588 YMR320WYMR320W 306 nt4.91□□□□□ -1.62
PUB1P32588 SWS2YNL081C 432 nt4.91□□□□□ -1.62
PUB1P32588 OST2YOR103C 393 nt4.91□□□□□ -1.62 RIP-Chip
PUB1P32588 CUR1YPR158W 759 nt4.91□□□□□ -1.62
PUB1P32588 ALD2YMR170C 1521 nt4.91□□□□□ -1.62
PUB1P32588 BRF1YGR246C 1791 nt4.91□□□□□ -1.62
PUB1P32588 MSA1YOR066W 1890 nt4.9□□□□□ -1.62
PUB1P32588 HXT17YNR072W 1695 nt4.9□□□□□ -1.62
PUB1P32588 RAT1YOR048C 3021 nt4.9□□□□□ -1.62 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms