Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.77■□□□□ 0.92
CCKBRP32239 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCKBRP32239 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCKBRP32239 ABCB10P4-201ENST00000566803 2184 ntBASIC20.76■□□□□ 0.91
CCKBRP32239 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
CCKBRP32239 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCKBRP32239 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.76■□□□□ 0.91
CCKBRP32239 MIR663A-201ENST00000385250 93 ntBASIC20.76■□□□□ 0.91
CCKBRP32239 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCKBRP32239 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.76■□□□□ 0.91
CCKBRP32239 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.76■□□□□ 0.91
CCKBRP32239 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCKBRP32239 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCKBRP32239 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCKBRP32239 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCKBRP32239 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCKBRP32239 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.75■□□□□ 0.91
CCKBRP32239 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCKBRP32239 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCKBRP32239 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCKBRP32239 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.75■□□□□ 0.91
CCKBRP32239 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.75■□□□□ 0.91
CCKBRP32239 MFSD11-216ENST00000590393 1141 ntBASIC20.75■□□□□ 0.91
CCKBRP32239 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCKBRP32239 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCKBRP32239 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.75■□□□□ 0.91
CCKBRP32239 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCKBRP32239 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.74■□□□□ 0.91
CCKBRP32239 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.74■□□□□ 0.91
CCKBRP32239 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CCKBRP32239 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.74■□□□□ 0.91
CCKBRP32239 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 AC104187.1-201ENST00000607510 612 ntBASIC20.74■□□□□ 0.91
CCKBRP32239 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCKBRP32239 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
CCKBRP32239 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCKBRP32239 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCKBRP32239 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCKBRP32239 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCKBRP32239 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCKBRP32239 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.73■□□□□ 0.91
CCKBRP32239 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CCKBRP32239 AL355802.2-201ENST00000402069 882 ntBASIC20.73■□□□□ 0.91
CCKBRP32239 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.73■□□□□ 0.91
CCKBRP32239 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.73■□□□□ 0.91
CCKBRP32239 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.73■□□□□ 0.91
CCKBRP32239 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCKBRP32239 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCKBRP32239 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCKBRP32239 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCKBRP32239 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.73■□□□□ 0.91
CCKBRP32239 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCKBRP32239 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCKBRP32239 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCKBRP32239 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCKBRP32239 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.72■□□□□ 0.91
CCKBRP32239 GPX1P1-201ENST00000388829 606 ntBASIC20.72■□□□□ 0.91
CCKBRP32239 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.72■□□□□ 0.91
CCKBRP32239 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCKBRP32239 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCKBRP32239 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCKBRP32239 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.71■□□□□ 0.91
CCKBRP32239 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.71■□□□□ 0.91
CCKBRP32239 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
CCKBRP32239 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCKBRP32239 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCKBRP32239 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
CCKBRP32239 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CCKBRP32239 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CCKBRP32239 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.7■□□□□ 0.9
CCKBRP32239 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.7■□□□□ 0.9
CCKBRP32239 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.7■□□□□ 0.9
CCKBRP32239 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.7■□□□□ 0.9
CCKBRP32239 AC231657.2-201ENST00000624556 255 ntBASIC20.7■□□□□ 0.9
CCKBRP32239 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.7■□□□□ 0.9
CCKBRP32239 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCKBRP32239 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms