Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 GAS7-202ENST00000396115 929 ntTSL 5 BASIC31■■■□□ 2.55
CPS1P31327 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31■■■□□ 2.55
CPS1P31327 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC31■■■□□ 2.55
CPS1P31327 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
CPS1P31327 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31■■■□□ 2.55
CPS1P31327 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CPS1P31327 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CPS1P31327 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CPS1P31327 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC31■■■□□ 2.55
CPS1P31327 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CPS1P31327 AC008550.1-201ENST00000511500 884 ntBASIC30.99■■■□□ 2.55
CPS1P31327 MYC-209ENST00000641252 345 ntBASIC30.99■■■□□ 2.55
CPS1P31327 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CPS1P31327 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CPS1P31327 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.98■■■□□ 2.55
CPS1P31327 AC073912.3-201ENST00000624414 853 ntBASIC30.98■■■□□ 2.55
CPS1P31327 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CPS1P31327 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CPS1P31327 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CPS1P31327 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
CPS1P31327 AC128676.1-201ENST00000454392 318 ntBASIC30.98■■■□□ 2.55
CPS1P31327 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CPS1P31327 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC30.98■■■□□ 2.55
CPS1P31327 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
CPS1P31327 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.97■■■□□ 2.55
CPS1P31327 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CPS1P31327 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CPS1P31327 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CPS1P31327 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CPS1P31327 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.97■■■□□ 2.55
CPS1P31327 MAX-217ENST00000557277 728 ntTSL 3 BASIC30.97■■■□□ 2.55
CPS1P31327 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.97■■■□□ 2.55
CPS1P31327 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CPS1P31327 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CPS1P31327 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.96■■■□□ 2.55
CPS1P31327 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.96■■■□□ 2.55
CPS1P31327 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CPS1P31327 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.95■■■□□ 2.55
CPS1P31327 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.95■■■□□ 2.55
CPS1P31327 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC30.95■■■□□ 2.55
CPS1P31327 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC30.95■■■□□ 2.55
CPS1P31327 AC013268.1-206ENST00000638368 961 ntBASIC30.95■■■□□ 2.55
CPS1P31327 AC112229.1-201ENST00000639295 961 ntBASIC30.95■■■□□ 2.55
CPS1P31327 AC005224.4-201ENST00000583262 1652 ntBASIC30.95■■■□□ 2.54
CPS1P31327 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.94■■■□□ 2.54
CPS1P31327 ECEL1P3-201ENST00000427961 737 ntBASIC30.94■■■□□ 2.54
CPS1P31327 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
CPS1P31327 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CPS1P31327 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.93■■■□□ 2.54
CPS1P31327 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CPS1P31327 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CPS1P31327 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.93■■■□□ 2.54
CPS1P31327 AC010141.3-201ENST00000456659 717 ntBASIC30.93■■■□□ 2.54
CPS1P31327 AP001160.3-201ENST00000601484 763 ntBASIC30.93■■■□□ 2.54
CPS1P31327 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
CPS1P31327 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CPS1P31327 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CPS1P31327 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CPS1P31327 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CPS1P31327 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CPS1P31327 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC30.92■■■□□ 2.54
CPS1P31327 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CPS1P31327 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CPS1P31327 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CPS1P31327 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.92■■■□□ 2.54
CPS1P31327 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CPS1P31327 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CPS1P31327 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
CPS1P31327 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CPS1P31327 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CPS1P31327 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
CPS1P31327 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CPS1P31327 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.91■■■□□ 2.54
CPS1P31327 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.91■■■□□ 2.54
CPS1P31327 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.91■■■□□ 2.54
CPS1P31327 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.91■■■□□ 2.54
CPS1P31327 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.9■■■□□ 2.54
CPS1P31327 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CPS1P31327 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CPS1P31327 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CPS1P31327 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.9■■■□□ 2.54
CPS1P31327 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.9■■■□□ 2.54
CPS1P31327 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
CPS1P31327 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CPS1P31327 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
CPS1P31327 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CPS1P31327 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CPS1P31327 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CPS1P31327 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CPS1P31327 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.89■■■□□ 2.54
CPS1P31327 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC30.89■■■□□ 2.54
CPS1P31327 RHOD-202ENST00000532559 538 ntTSL 3 BASIC30.89■■■□□ 2.54
CPS1P31327 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.53
CPS1P31327 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.89■■■□□ 2.53
CPS1P31327 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC30.88■■■□□ 2.53
CPS1P31327 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CPS1P31327 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CPS1P31327 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CPS1P31327 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.88■■■□□ 2.53
CPS1P31327 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms