Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.28■□□□□ 0.52
COL8A2P25067 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL8A2P25067 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL8A2P25067 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.28■□□□□ 0.52
COL8A2P25067 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.28■□□□□ 0.52
COL8A2P25067 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL8A2P25067 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.27■□□□□ 0.52
COL8A2P25067 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL8A2P25067 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL8A2P25067 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL8A2P25067 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
COL8A2P25067 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL8A2P25067 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.27■□□□□ 0.52
COL8A2P25067 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL8A2P25067 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.27■□□□□ 0.52
COL8A2P25067 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COL8A2P25067 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL8A2P25067 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.27■□□□□ 0.52
COL8A2P25067 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL8A2P25067 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL8A2P25067 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL8A2P25067 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.26■□□□□ 0.51
COL8A2P25067 AC079089.2-201ENST00000531211 1277 ntBASIC18.26■□□□□ 0.51
COL8A2P25067 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.26■□□□□ 0.51
COL8A2P25067 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.26■□□□□ 0.51
COL8A2P25067 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL8A2P25067 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL8A2P25067 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL8A2P25067 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL8A2P25067 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL8A2P25067 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL8A2P25067 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL8A2P25067 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.25■□□□□ 0.51
COL8A2P25067 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.25■□□□□ 0.51
COL8A2P25067 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL8A2P25067 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.25■□□□□ 0.51
COL8A2P25067 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.25■□□□□ 0.51
COL8A2P25067 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.25■□□□□ 0.51
COL8A2P25067 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.25■□□□□ 0.51
COL8A2P25067 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL8A2P25067 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL8A2P25067 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.25■□□□□ 0.51
COL8A2P25067 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL8A2P25067 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL8A2P25067 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL8A2P25067 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL8A2P25067 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL8A2P25067 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.24■□□□□ 0.51
COL8A2P25067 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL8A2P25067 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL8A2P25067 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL8A2P25067 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.23■□□□□ 0.51
COL8A2P25067 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.23■□□□□ 0.51
COL8A2P25067 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.23■□□□□ 0.51
COL8A2P25067 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.23■□□□□ 0.51
COL8A2P25067 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.23■□□□□ 0.51
COL8A2P25067 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.23■□□□□ 0.51
COL8A2P25067 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.23■□□□□ 0.51
COL8A2P25067 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
COL8A2P25067 AL137784.2-201ENST00000607332 1000 ntBASIC18.23■□□□□ 0.51
COL8A2P25067 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 AC092437.1-201ENST00000624794 1048 ntBASIC18.23■□□□□ 0.51
COL8A2P25067 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.23■□□□□ 0.51
COL8A2P25067 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL8A2P25067 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.22■□□□□ 0.51
COL8A2P25067 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.22■□□□□ 0.51
COL8A2P25067 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL8A2P25067 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.22■□□□□ 0.51
COL8A2P25067 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
COL8A2P25067 AC004911.1-201ENST00000416316 871 ntBASIC18.22■□□□□ 0.51
COL8A2P25067 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.22■□□□□ 0.51
COL8A2P25067 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.22■□□□□ 0.51
COL8A2P25067 KRT18P61-201ENST00000585825 1298 ntBASIC18.22■□□□□ 0.51
COL8A2P25067 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
COL8A2P25067 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL8A2P25067 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
COL8A2P25067 AP004607.4-201ENST00000530158 1459 ntBASIC18.21■□□□□ 0.51
COL8A2P25067 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.21■□□□□ 0.51
COL8A2P25067 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL8A2P25067 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL8A2P25067 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL8A2P25067 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.21■□□□□ 0.51
COL8A2P25067 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.21■□□□□ 0.51
COL8A2P25067 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL8A2P25067 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms