Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 RP9P-202ENST00000450133 1212 ntBASIC19.8■□□□□ 0.76
SMIM18P0DKX4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.8■□□□□ 0.76
SMIM18P0DKX4 AC093536.1-201ENST00000569153 554 ntBASIC19.8■□□□□ 0.76
SMIM18P0DKX4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SMIM18P0DKX4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 DUX4L11-201ENST00000611504 1267 ntBASIC19.78■□□□□ 0.76
SMIM18P0DKX4 DUX4L12-201ENST00000614593 1267 ntBASIC19.78■□□□□ 0.76
SMIM18P0DKX4 DUX4L14-201ENST00000621227 1267 ntBASIC19.78■□□□□ 0.76
SMIM18P0DKX4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 AC073314.1-201ENST00000568729 2216 ntBASIC19.78■□□□□ 0.76
SMIM18P0DKX4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM18P0DKX4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM18P0DKX4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
SMIM18P0DKX4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.77■□□□□ 0.76
SMIM18P0DKX4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMIM18P0DKX4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMIM18P0DKX4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SMIM18P0DKX4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SMIM18P0DKX4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM18P0DKX4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM18P0DKX4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SMIM18P0DKX4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms