Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 RPL30YGL030W 318 nt2.88□□□□□ -1.95
RPL40BP0CH09 YGL082WYGL082W 1146 nt2.88□□□□□ -1.95
RPL40BP0CH09 YPL276WYPL276W 438 nt2.88□□□□□ -1.95
RPL40BP0CH09 snR37snR37 386 nt2.88□□□□□ -1.95
RPL40BP0CH09 FRM2YCL026C-A 582 nt2.88□□□□□ -1.95
RPL40BP0CH09 FAA2YER015W 2235 nt2.88□□□□□ -1.95
RPL40BP0CH09 YLR177WYLR177W 1887 nt2.88□□□□□ -1.95
RPL40BP0CH09 YKL222CYKL222C 2118 nt2.87□□□□□ -1.95
RPL40BP0CH09 SIR1YKR101W 1965 nt2.87□□□□□ -1.95
RPL40BP0CH09 SNT1YCR033W 3681 nt2.87□□□□□ -1.95
RPL40BP0CH09 YPT35YHR105W 645 nt2.87□□□□□ -1.95
RPL40BP0CH09 YAL004WYAL004W 648 nt2.87□□□□□ -1.95
RPL40BP0CH09 GOT1YMR292W 417 nt2.87□□□□□ -1.95
RPL40BP0CH09 TPM1YNL079C 600 nt2.87□□□□□ -1.95
RPL40BP0CH09 RRG9YNL213C 645 nt2.87□□□□□ -1.95
RPL40BP0CH09 YHR080CYHR080C 4038 nt2.87□□□□□ -1.95
RPL40BP0CH09 DNM1YLL001W 2274 nt2.87□□□□□ -1.95
RPL40BP0CH09 APN2YBL019W 1563 nt2.87□□□□□ -1.95
RPL40BP0CH09 UBP15YMR304W 3693 nt2.87□□□□□ -1.95
RPL40BP0CH09 PSK2YOL045W 3306 nt2.86□□□□□ -1.95
RPL40BP0CH09 ARP4YJL081C 1470 nt2.86□□□□□ -1.95
RPL40BP0CH09 IBA57YJR122W 1494 nt2.86□□□□□ -1.95
RPL40BP0CH09 YIL102C-AYIL102C-A 228 nt2.86□□□□□ -1.95
RPL40BP0CH09 RPS7AYOR096W 573 nt2.86□□□□□ -1.95
RPL40BP0CH09 YMR317WYMR317W 3423 nt2.86□□□□□ -1.95
RPL40BP0CH09 RPN1YHR027C 2982 nt2.86□□□□□ -1.95
RPL40BP0CH09 HBT1YDL223C 3141 nt2.86□□□□□ -1.95
RPL40BP0CH09 BUD5YCR038C 1929 nt2.85□□□□□ -1.95
RPL40BP0CH09 CHS3YBR023C 3498 nt2.85□□□□□ -1.95
RPL40BP0CH09 GAT2YMR136W 1683 nt2.85□□□□□ -1.95
RPL40BP0CH09 PRS5YOL061W 1491 nt2.85□□□□□ -1.95
RPL40BP0CH09 SSY1YDR160W 2559 nt2.85□□□□□ -1.95
RPL40BP0CH09 MAL12YGR292W 1755 nt2.85□□□□□ -1.95
RPL40BP0CH09 MAL32YBR299W 1755 nt2.85□□□□□ -1.95
RPL40BP0CH09 VPS33YLR396C 2076 nt2.85□□□□□ -1.95
RPL40BP0CH09 BET1YIL004C 429 nt2.85□□□□□ -1.95
RPL40BP0CH09 RPC37YKR025W 849 nt2.85□□□□□ -1.95
RPL40BP0CH09 NIT3YLR351C 876 nt2.85□□□□□ -1.95
RPL40BP0CH09 MSN4YKL062W 1893 nt2.85□□□□□ -1.95
RPL40BP0CH09 SUP45YBR143C 1314 nt2.85□□□□□ -1.95
RPL40BP0CH09 PEX1YKL197C 3132 nt2.84□□□□□ -1.95
RPL40BP0CH09 ULP1YPL020C 1866 nt2.84□□□□□ -1.95
RPL40BP0CH09 PHM6YDR281C 315 nt2.84□□□□□ -1.95
RPL40BP0CH09 YIL163CYIL163C 354 nt2.84□□□□□ -1.95
RPL40BP0CH09 YNL228WYNL228W 777 nt2.84□□□□□ -1.95
RPL40BP0CH09 REC8YPR007C 2043 nt2.84□□□□□ -1.95
RPL40BP0CH09 SPT16YGL207W 3108 nt2.84□□□□□ -1.96
RPL40BP0CH09 PDR3YBL005W 2931 nt2.83□□□□□ -1.96
RPL40BP0CH09 ATG11YPR049C 3537 nt2.83□□□□□ -1.96
RPL40BP0CH09 YCR101CYCR101C 549 nt2.83□□□□□ -1.96
RPL40BP0CH09 SCM4YGR049W 564 nt2.83□□□□□ -1.96
RPL40BP0CH09 LNP1YHR192W 837 nt2.83□□□□□ -1.96
RPL40BP0CH09 PHD1YKL043W 1101 nt2.83□□□□□ -1.96
RPL40BP0CH09 NPL6YMR091C 1308 nt2.83□□□□□ -1.96
RPL40BP0CH09 FLO10YKR102W 3510 nt2.83□□□□□ -1.96
RPL40BP0CH09 TFA1YKL028W 1449 nt2.83□□□□□ -1.96
RPL40BP0CH09 ROG1YGL144C 2058 nt2.83□□□□□ -1.96
RPL40BP0CH09 DAS2YDR020C 699 nt2.82□□□□□ -1.96
RPL40BP0CH09 GPI19YDR437W 423 nt2.82□□□□□ -1.96
RPL40BP0CH09 NSE1YLR007W 1011 nt2.82□□□□□ -1.96
RPL40BP0CH09 YBR103C-AYBR103C-A 144 nt2.82□□□□□ -1.96
RPL40BP0CH09 CDC40YDR364C 1368 nt2.82□□□□□ -1.96
RPL40BP0CH09 FAR1YJL157C 2493 nt2.81□□□□□ -1.96
RPL40BP0CH09 DOA4YDR069C 2781 nt2.81□□□□□ -1.96
RPL40BP0CH09 GRE3YHR104W 984 nt2.81□□□□□ -1.96
RPL40BP0CH09 YIL025CYIL025C 375 nt2.81□□□□□ -1.96
RPL40BP0CH09 MRP8YKL142W 660 nt2.81□□□□□ -1.96
RPL40BP0CH09 ECI1YLR284C 843 nt2.81□□□□□ -1.96
RPL40BP0CH09 YGK3YOL128C 1128 nt2.81□□□□□ -1.96
RPL40BP0CH09 snR17asnR17a 333 nt2.81□□□□□ -1.96
RPL40BP0CH09 RRG8YPR116W 834 nt2.81□□□□□ -1.96
RPL40BP0CH09 ARR1YPR199C 885 nt2.81□□□□□ -1.96
RPL40BP0CH09 YBR196C-BYBR196C-B 105 nt2.81□□□□□ -1.96
RPL40BP0CH09 TLC1TLC1 1301 nt2.81□□□□□ -1.96
RPL40BP0CH09 OSW7YFR039C 1533 nt2.81□□□□□ -1.96
RPL40BP0CH09 TFB2YPL122C 1542 nt2.81□□□□□ -1.96
RPL40BP0CH09 YDR186CYDR186C 2634 nt2.81□□□□□ -1.96
RPL40BP0CH09 NUP100YKL068W 2880 nt2.81□□□□□ -1.96
RPL40BP0CH09 CIN8YEL061C 3003 nt2.81□□□□□ -1.96
RPL40BP0CH09 ARP10YDR106W 855 nt2.8□□□□□ -1.96
RPL40BP0CH09 SNM1YDR478W 597 nt2.8□□□□□ -1.96
RPL40BP0CH09 PRE1YER012W 597 nt2.8□□□□□ -1.96
RPL40BP0CH09 SLX8YER116C 825 nt2.8□□□□□ -1.96
RPL40BP0CH09 POG1YIL122W 1056 nt2.8□□□□□ -1.96
RPL40BP0CH09 YAL037WYAL037W 804 nt2.8□□□□□ -1.96
RPL40BP0CH09 YKT6YKL196C 603 nt2.8□□□□□ -1.96
RPL40BP0CH09 CSM3YMR048W 954 nt2.8□□□□□ -1.96
RPL40BP0CH09 KAP95YLR347C 2586 nt2.8□□□□□ -1.96
RPL40BP0CH09 DAP2YHR028C 2457 nt2.8□□□□□ -1.96
RPL40BP0CH09 CHS2YBR038W 2892 nt2.79□□□□□ -1.96
RPL40BP0CH09 YDL180WYDL180W 1644 nt2.79□□□□□ -1.96
RPL40BP0CH09 tW(CCA)G1tW(CCA)G1 72 nt2.79□□□□□ -1.96
RPL40BP0CH09 tW(CCA)G2tW(CCA)G2 72 nt2.79□□□□□ -1.96
RPL40BP0CH09 tW(CCA)JtW(CCA)J 72 nt2.79□□□□□ -1.96
RPL40BP0CH09 tW(CCA)KtW(CCA)K 72 nt2.79□□□□□ -1.96
RPL40BP0CH09 tW(CCA)MtW(CCA)M 72 nt2.79□□□□□ -1.96
RPL40BP0CH09 tW(CCA)PtW(CCA)P 72 nt2.79□□□□□ -1.96
RPL40BP0CH09 ASG7YJL170C 630 nt2.79□□□□□ -1.96
RPL40BP0CH09 YMR086C-AYMR086C-A 339 nt2.79□□□□□ -1.96
RPL40BP0CH09 YLR001CYLR001C 2589 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms