Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 RPL30YGL030W 318 nt2.88□□□□□ -1.95
RPL40AP0CH08 YGL082WYGL082W 1146 nt2.88□□□□□ -1.95
RPL40AP0CH08 YPL276WYPL276W 438 nt2.88□□□□□ -1.95
RPL40AP0CH08 snR37snR37 386 nt2.88□□□□□ -1.95
RPL40AP0CH08 FRM2YCL026C-A 582 nt2.88□□□□□ -1.95
RPL40AP0CH08 FAA2YER015W 2235 nt2.88□□□□□ -1.95
RPL40AP0CH08 YLR177WYLR177W 1887 nt2.88□□□□□ -1.95
RPL40AP0CH08 YKL222CYKL222C 2118 nt2.87□□□□□ -1.95
RPL40AP0CH08 SIR1YKR101W 1965 nt2.87□□□□□ -1.95
RPL40AP0CH08 SNT1YCR033W 3681 nt2.87□□□□□ -1.95
RPL40AP0CH08 YPT35YHR105W 645 nt2.87□□□□□ -1.95
RPL40AP0CH08 YAL004WYAL004W 648 nt2.87□□□□□ -1.95
RPL40AP0CH08 GOT1YMR292W 417 nt2.87□□□□□ -1.95
RPL40AP0CH08 TPM1YNL079C 600 nt2.87□□□□□ -1.95
RPL40AP0CH08 RRG9YNL213C 645 nt2.87□□□□□ -1.95
RPL40AP0CH08 YHR080CYHR080C 4038 nt2.87□□□□□ -1.95
RPL40AP0CH08 DNM1YLL001W 2274 nt2.87□□□□□ -1.95
RPL40AP0CH08 APN2YBL019W 1563 nt2.87□□□□□ -1.95
RPL40AP0CH08 UBP15YMR304W 3693 nt2.87□□□□□ -1.95
RPL40AP0CH08 PSK2YOL045W 3306 nt2.86□□□□□ -1.95
RPL40AP0CH08 ARP4YJL081C 1470 nt2.86□□□□□ -1.95
RPL40AP0CH08 IBA57YJR122W 1494 nt2.86□□□□□ -1.95
RPL40AP0CH08 YIL102C-AYIL102C-A 228 nt2.86□□□□□ -1.95
RPL40AP0CH08 RPS7AYOR096W 573 nt2.86□□□□□ -1.95
RPL40AP0CH08 YMR317WYMR317W 3423 nt2.86□□□□□ -1.95
RPL40AP0CH08 RPN1YHR027C 2982 nt2.86□□□□□ -1.95
RPL40AP0CH08 HBT1YDL223C 3141 nt2.86□□□□□ -1.95
RPL40AP0CH08 BUD5YCR038C 1929 nt2.85□□□□□ -1.95
RPL40AP0CH08 CHS3YBR023C 3498 nt2.85□□□□□ -1.95
RPL40AP0CH08 GAT2YMR136W 1683 nt2.85□□□□□ -1.95
RPL40AP0CH08 PRS5YOL061W 1491 nt2.85□□□□□ -1.95
RPL40AP0CH08 SSY1YDR160W 2559 nt2.85□□□□□ -1.95
RPL40AP0CH08 MAL12YGR292W 1755 nt2.85□□□□□ -1.95
RPL40AP0CH08 MAL32YBR299W 1755 nt2.85□□□□□ -1.95
RPL40AP0CH08 VPS33YLR396C 2076 nt2.85□□□□□ -1.95
RPL40AP0CH08 BET1YIL004C 429 nt2.85□□□□□ -1.95
RPL40AP0CH08 RPC37YKR025W 849 nt2.85□□□□□ -1.95
RPL40AP0CH08 NIT3YLR351C 876 nt2.85□□□□□ -1.95
RPL40AP0CH08 MSN4YKL062W 1893 nt2.85□□□□□ -1.95
RPL40AP0CH08 SUP45YBR143C 1314 nt2.85□□□□□ -1.95
RPL40AP0CH08 PEX1YKL197C 3132 nt2.84□□□□□ -1.95
RPL40AP0CH08 ULP1YPL020C 1866 nt2.84□□□□□ -1.95
RPL40AP0CH08 PHM6YDR281C 315 nt2.84□□□□□ -1.95
RPL40AP0CH08 YIL163CYIL163C 354 nt2.84□□□□□ -1.95
RPL40AP0CH08 YNL228WYNL228W 777 nt2.84□□□□□ -1.95
RPL40AP0CH08 REC8YPR007C 2043 nt2.84□□□□□ -1.95
RPL40AP0CH08 SPT16YGL207W 3108 nt2.84□□□□□ -1.96
RPL40AP0CH08 PDR3YBL005W 2931 nt2.83□□□□□ -1.96
RPL40AP0CH08 ATG11YPR049C 3537 nt2.83□□□□□ -1.96
RPL40AP0CH08 YCR101CYCR101C 549 nt2.83□□□□□ -1.96
RPL40AP0CH08 SCM4YGR049W 564 nt2.83□□□□□ -1.96
RPL40AP0CH08 LNP1YHR192W 837 nt2.83□□□□□ -1.96
RPL40AP0CH08 PHD1YKL043W 1101 nt2.83□□□□□ -1.96
RPL40AP0CH08 NPL6YMR091C 1308 nt2.83□□□□□ -1.96
RPL40AP0CH08 FLO10YKR102W 3510 nt2.83□□□□□ -1.96
RPL40AP0CH08 TFA1YKL028W 1449 nt2.83□□□□□ -1.96
RPL40AP0CH08 ROG1YGL144C 2058 nt2.83□□□□□ -1.96
RPL40AP0CH08 DAS2YDR020C 699 nt2.82□□□□□ -1.96
RPL40AP0CH08 GPI19YDR437W 423 nt2.82□□□□□ -1.96
RPL40AP0CH08 NSE1YLR007W 1011 nt2.82□□□□□ -1.96
RPL40AP0CH08 YBR103C-AYBR103C-A 144 nt2.82□□□□□ -1.96
RPL40AP0CH08 CDC40YDR364C 1368 nt2.82□□□□□ -1.96
RPL40AP0CH08 FAR1YJL157C 2493 nt2.81□□□□□ -1.96
RPL40AP0CH08 DOA4YDR069C 2781 nt2.81□□□□□ -1.96
RPL40AP0CH08 GRE3YHR104W 984 nt2.81□□□□□ -1.96
RPL40AP0CH08 YIL025CYIL025C 375 nt2.81□□□□□ -1.96
RPL40AP0CH08 MRP8YKL142W 660 nt2.81□□□□□ -1.96
RPL40AP0CH08 ECI1YLR284C 843 nt2.81□□□□□ -1.96
RPL40AP0CH08 YGK3YOL128C 1128 nt2.81□□□□□ -1.96
RPL40AP0CH08 snR17asnR17a 333 nt2.81□□□□□ -1.96
RPL40AP0CH08 RRG8YPR116W 834 nt2.81□□□□□ -1.96
RPL40AP0CH08 ARR1YPR199C 885 nt2.81□□□□□ -1.96
RPL40AP0CH08 YBR196C-BYBR196C-B 105 nt2.81□□□□□ -1.96
RPL40AP0CH08 TLC1TLC1 1301 nt2.81□□□□□ -1.96
RPL40AP0CH08 OSW7YFR039C 1533 nt2.81□□□□□ -1.96
RPL40AP0CH08 TFB2YPL122C 1542 nt2.81□□□□□ -1.96
RPL40AP0CH08 YDR186CYDR186C 2634 nt2.81□□□□□ -1.96
RPL40AP0CH08 NUP100YKL068W 2880 nt2.81□□□□□ -1.96
RPL40AP0CH08 CIN8YEL061C 3003 nt2.81□□□□□ -1.96
RPL40AP0CH08 ARP10YDR106W 855 nt2.8□□□□□ -1.96
RPL40AP0CH08 SNM1YDR478W 597 nt2.8□□□□□ -1.96
RPL40AP0CH08 PRE1YER012W 597 nt2.8□□□□□ -1.96
RPL40AP0CH08 SLX8YER116C 825 nt2.8□□□□□ -1.96
RPL40AP0CH08 POG1YIL122W 1056 nt2.8□□□□□ -1.96
RPL40AP0CH08 YAL037WYAL037W 804 nt2.8□□□□□ -1.96
RPL40AP0CH08 YKT6YKL196C 603 nt2.8□□□□□ -1.96
RPL40AP0CH08 CSM3YMR048W 954 nt2.8□□□□□ -1.96
RPL40AP0CH08 KAP95YLR347C 2586 nt2.8□□□□□ -1.96
RPL40AP0CH08 DAP2YHR028C 2457 nt2.8□□□□□ -1.96
RPL40AP0CH08 CHS2YBR038W 2892 nt2.79□□□□□ -1.96
RPL40AP0CH08 YDL180WYDL180W 1644 nt2.79□□□□□ -1.96
RPL40AP0CH08 tW(CCA)G1tW(CCA)G1 72 nt2.79□□□□□ -1.96
RPL40AP0CH08 tW(CCA)G2tW(CCA)G2 72 nt2.79□□□□□ -1.96
RPL40AP0CH08 tW(CCA)JtW(CCA)J 72 nt2.79□□□□□ -1.96
RPL40AP0CH08 tW(CCA)KtW(CCA)K 72 nt2.79□□□□□ -1.96
RPL40AP0CH08 tW(CCA)MtW(CCA)M 72 nt2.79□□□□□ -1.96
RPL40AP0CH08 tW(CCA)PtW(CCA)P 72 nt2.79□□□□□ -1.96
RPL40AP0CH08 ASG7YJL170C 630 nt2.79□□□□□ -1.96
RPL40AP0CH08 YMR086C-AYMR086C-A 339 nt2.79□□□□□ -1.96
RPL40AP0CH08 YLR001CYLR001C 2589 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms