Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
UBCP0CG48 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.91■□□□□ 0.62
UBCP0CG48 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.91■□□□□ 0.62
UBCP0CG48 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
UBCP0CG48 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.9■□□□□ 0.62
UBCP0CG48 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.9■□□□□ 0.62
UBCP0CG48 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 AC244015.2-201ENST00000616358 1861 ntBASIC18.9■□□□□ 0.62
UBCP0CG48 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UBCP0CG48 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.9■□□□□ 0.62
UBCP0CG48 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBCP0CG48 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBCP0CG48 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBCP0CG48 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBCP0CG48 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBCP0CG48 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBCP0CG48 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBCP0CG48 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBCP0CG48 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBCP0CG48 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.89■□□□□ 0.61
UBCP0CG48 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UBCP0CG48 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBCP0CG48 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBCP0CG48 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
UBCP0CG48 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBCP0CG48 AC026310.3-201ENST00000625186 2373 ntBASIC18.89■□□□□ 0.61
UBCP0CG48 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.89■□□□□ 0.61
UBCP0CG48 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
UBCP0CG48 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.88■□□□□ 0.61
UBCP0CG48 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
UBCP0CG48 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.88■□□□□ 0.61
UBCP0CG48 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.88■□□□□ 0.61
UBCP0CG48 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
UBCP0CG48 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.88■□□□□ 0.61
UBCP0CG48 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBCP0CG48 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBCP0CG48 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBCP0CG48 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBCP0CG48 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBCP0CG48 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBCP0CG48 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBCP0CG48 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.87■□□□□ 0.61
UBCP0CG48 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.87■□□□□ 0.61
UBCP0CG48 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.87■□□□□ 0.61
UBCP0CG48 AL031602.1-201ENST00000633169 911 ntBASIC18.87■□□□□ 0.61
UBCP0CG48 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.86■□□□□ 0.61
UBCP0CG48 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.86■□□□□ 0.61
UBCP0CG48 UNC93B8-201ENST00000511903 705 ntBASIC18.86■□□□□ 0.61
UBCP0CG48 AL451085.2-201ENST00000605085 799 ntBASIC18.86■□□□□ 0.61
UBCP0CG48 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.86■□□□□ 0.61
UBCP0CG48 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBCP0CG48 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBCP0CG48 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBCP0CG48 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBCP0CG48 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBCP0CG48 AC133637.1-201ENST00000624115 1537 ntBASIC18.85■□□□□ 0.61
UBCP0CG48 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBCP0CG48 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.85■□□□□ 0.61
UBCP0CG48 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.85■□□□□ 0.61
UBCP0CG48 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBCP0CG48 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.85■□□□□ 0.61
UBCP0CG48 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.85■□□□□ 0.61
UBCP0CG48 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBCP0CG48 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBCP0CG48 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.85■□□□□ 0.61
UBCP0CG48 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.85■□□□□ 0.61
UBCP0CG48 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBCP0CG48 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.84■□□□□ 0.61
UBCP0CG48 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
UBCP0CG48 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBCP0CG48 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBCP0CG48 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms