Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.17■□□□□ 0.5
CD74P04233 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD74P04233 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CD74P04233 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CD74P04233 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD74P04233 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD74P04233 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD74P04233 KRT18P60-201ENST00000312876 1297 ntBASIC18.16■□□□□ 0.5
CD74P04233 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD74P04233 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CD74P04233 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.15■□□□□ 0.5
CD74P04233 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CD74P04233 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CD74P04233 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CD74P04233 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
CD74P04233 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.15■□□□□ 0.5
CD74P04233 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.15■□□□□ 0.5
CD74P04233 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CD74P04233 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 LINC01006-201ENST00000333319 2292 ntBASIC18.15■□□□□ 0.5
CD74P04233 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.15■□□□□ 0.5
CD74P04233 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CD74P04233 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD74P04233 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.14■□□□□ 0.5
CD74P04233 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.5
CD74P04233 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.14■□□□□ 0.49
CD74P04233 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CD74P04233 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.14■□□□□ 0.49
CD74P04233 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CD74P04233 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD74P04233 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CD74P04233 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD74P04233 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD74P04233 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD74P04233 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CD74P04233 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD74P04233 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD74P04233 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.13■□□□□ 0.49
CD74P04233 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.13■□□□□ 0.49
CD74P04233 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.13■□□□□ 0.49
CD74P04233 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD74P04233 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.13■□□□□ 0.49
CD74P04233 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.13■□□□□ 0.49
CD74P04233 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD74P04233 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.12■□□□□ 0.49
CD74P04233 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.12■□□□□ 0.49
CD74P04233 AC005703.6-201ENST00000623265 1329 ntBASIC18.12■□□□□ 0.49
CD74P04233 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.12■□□□□ 0.49
CD74P04233 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.12■□□□□ 0.49
CD74P04233 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD74P04233 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.12■□□□□ 0.49
CD74P04233 FEM1AP1-201ENST00000431297 1995 ntBASIC18.11■□□□□ 0.49
CD74P04233 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CD74P04233 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD74P04233 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.11■□□□□ 0.49
CD74P04233 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD74P04233 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.11■□□□□ 0.49
CD74P04233 AC104564.3-201ENST00000582367 638 ntBASIC18.11■□□□□ 0.49
CD74P04233 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD74P04233 OXCT2P1-201ENST00000447263 1535 ntBASIC18.11■□□□□ 0.49
CD74P04233 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD74P04233 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms