Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
GGPS1O95749 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
GGPS1O95749 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.36■■□□□ 1.49
GGPS1O95749 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.36■■□□□ 1.49
GGPS1O95749 KRT19P1-201ENST00000405746 1186 ntBASIC24.36■■□□□ 1.49
GGPS1O95749 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
GGPS1O95749 AC079089.2-201ENST00000531211 1277 ntBASIC24.36■■□□□ 1.49
GGPS1O95749 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.36■■□□□ 1.49
GGPS1O95749 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.36■■□□□ 1.49
GGPS1O95749 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
GGPS1O95749 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
GGPS1O95749 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
GGPS1O95749 AC009237.3-201ENST00000393279 1427 ntBASIC24.35■■□□□ 1.49
GGPS1O95749 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.35■■□□□ 1.49
GGPS1O95749 DUSP8P5-201ENST00000422884 1815 ntBASIC24.35■■□□□ 1.49
GGPS1O95749 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
GGPS1O95749 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.35■■□□□ 1.49
GGPS1O95749 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.35■■□□□ 1.49
GGPS1O95749 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
GGPS1O95749 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.35■■□□□ 1.49
GGPS1O95749 AC080038.1-201ENST00000611274 1154 ntBASIC24.35■■□□□ 1.49
GGPS1O95749 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
GGPS1O95749 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
GGPS1O95749 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
GGPS1O95749 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.34■■□□□ 1.49
GGPS1O95749 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
GGPS1O95749 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
GGPS1O95749 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.34■■□□□ 1.49
GGPS1O95749 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.34■■□□□ 1.49
GGPS1O95749 AC068473.5-201ENST00000616428 2072 ntBASIC24.33■■□□□ 1.49
GGPS1O95749 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
GGPS1O95749 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
GGPS1O95749 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
GGPS1O95749 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
GGPS1O95749 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.33■■□□□ 1.49
GGPS1O95749 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
GGPS1O95749 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.33■■□□□ 1.48
GGPS1O95749 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.32■■□□□ 1.48
GGPS1O95749 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
GGPS1O95749 AC133561.1-201ENST00000568600 2415 ntBASIC24.32■■□□□ 1.48
GGPS1O95749 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GGPS1O95749 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GGPS1O95749 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.32■■□□□ 1.48
GGPS1O95749 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
GGPS1O95749 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GGPS1O95749 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GGPS1O95749 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
GGPS1O95749 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.32■■□□□ 1.48
GGPS1O95749 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GGPS1O95749 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.31■■□□□ 1.48
GGPS1O95749 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
GGPS1O95749 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
GGPS1O95749 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.31■■□□□ 1.48
GGPS1O95749 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.31■■□□□ 1.48
GGPS1O95749 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.31■■□□□ 1.48
GGPS1O95749 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.31■■□□□ 1.48
GGPS1O95749 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.31■■□□□ 1.48
GGPS1O95749 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
GGPS1O95749 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GGPS1O95749 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GGPS1O95749 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GGPS1O95749 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
GGPS1O95749 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
GGPS1O95749 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.3■■□□□ 1.48
GGPS1O95749 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
GGPS1O95749 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
GGPS1O95749 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.3■■□□□ 1.48
GGPS1O95749 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
GGPS1O95749 ESRRAP2-201ENST00000418437 1549 ntBASIC24.3■■□□□ 1.48
GGPS1O95749 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GGPS1O95749 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
GGPS1O95749 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
GGPS1O95749 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
GGPS1O95749 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.29■■□□□ 1.48
GGPS1O95749 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
GGPS1O95749 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.29■■□□□ 1.48
GGPS1O95749 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
GGPS1O95749 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GGPS1O95749 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GGPS1O95749 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
GGPS1O95749 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.28■■□□□ 1.48
GGPS1O95749 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.28■■□□□ 1.48
GGPS1O95749 BID-214ENST00000617586 542 ntTSL 5 BASIC24.28■■□□□ 1.48
GGPS1O95749 AC073111.5-205ENST00000641717 521 ntBASIC24.28■■□□□ 1.48
GGPS1O95749 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.28■■□□□ 1.48
GGPS1O95749 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
GGPS1O95749 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
GGPS1O95749 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 KRT87P-202ENST00000534226 1464 ntBASIC24.27■■□□□ 1.48
GGPS1O95749 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.27■■□□□ 1.48
GGPS1O95749 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
GGPS1O95749 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.27■■□□□ 1.48
GGPS1O95749 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
GGPS1O95749 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms