Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TDP2O95551 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.53■■□□□ 1.52
TDP2O95551 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TDP2O95551 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TDP2O95551 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TDP2O95551 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.52■■□□□ 1.52
TDP2O95551 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TDP2O95551 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
TDP2O95551 AC242852.2-201ENST00000615738 1807 ntBASIC24.51■■□□□ 1.51
TDP2O95551 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TDP2O95551 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.51■■□□□ 1.51
TDP2O95551 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TDP2O95551 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.51■■□□□ 1.51
TDP2O95551 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.51■■□□□ 1.51
TDP2O95551 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.51■■□□□ 1.51
TDP2O95551 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.51■■□□□ 1.51
TDP2O95551 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
TDP2O95551 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TDP2O95551 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.51■■□□□ 1.51
TDP2O95551 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TDP2O95551 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TDP2O95551 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.51■■□□□ 1.51
TDP2O95551 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TDP2O95551 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TDP2O95551 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TDP2O95551 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TDP2O95551 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TDP2O95551 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.5■■□□□ 1.51
TDP2O95551 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TDP2O95551 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TDP2O95551 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.5■■□□□ 1.51
TDP2O95551 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TDP2O95551 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TDP2O95551 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TDP2O95551 AL117328.2-201ENST00000624617 1940 ntBASIC24.49■■□□□ 1.51
TDP2O95551 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.49■■□□□ 1.51
TDP2O95551 AC027612.3-201ENST00000413684 1047 ntBASIC24.49■■□□□ 1.51
TDP2O95551 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TDP2O95551 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.49■■□□□ 1.51
TDP2O95551 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.49■■□□□ 1.51
TDP2O95551 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TDP2O95551 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TDP2O95551 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.49■■□□□ 1.51
TDP2O95551 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.48■■□□□ 1.51
TDP2O95551 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.48■■□□□ 1.51
TDP2O95551 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
TDP2O95551 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TDP2O95551 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.47■■□□□ 1.51
TDP2O95551 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.47■■□□□ 1.51
TDP2O95551 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.47■■□□□ 1.51
TDP2O95551 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 BX005040.4-201ENST00000637145 1518 ntBASIC24.47■■□□□ 1.51
TDP2O95551 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TDP2O95551 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 MIR935-201ENST00000401179 91 ntBASIC24.47■■□□□ 1.51
TDP2O95551 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.47■■□□□ 1.51
TDP2O95551 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TDP2O95551 ECEL1P1-201ENST00000373592 1742 ntBASIC24.47■■□□□ 1.51
TDP2O95551 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 AP004607.7-201ENST00000527152 1677 ntBASIC24.46■■□□□ 1.51
TDP2O95551 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TDP2O95551 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.46■■□□□ 1.51
TDP2O95551 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
TDP2O95551 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
TDP2O95551 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.46■■□□□ 1.51
TDP2O95551 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.46■■□□□ 1.51
TDP2O95551 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.46■■□□□ 1.51
TDP2O95551 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TDP2O95551 EP400NL-214ENST00000641289 2402 ntBASIC24.46■■□□□ 1.51
TDP2O95551 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
TDP2O95551 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TDP2O95551 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TDP2O95551 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TDP2O95551 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.45■■□□□ 1.5
TDP2O95551 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 AC026271.2-201ENST00000428091 497 ntBASIC24.45■■□□□ 1.5
TDP2O95551 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
TDP2O95551 TPRG1LP1-201ENST00000598702 760 ntBASIC24.45■■□□□ 1.5
TDP2O95551 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.45■■□□□ 1.5
TDP2O95551 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms