Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRAMEF4O60810 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 FAM99A-202ENST00000538190 1989 ntBASIC20.86■□□□□ 0.93
PRAMEF4O60810 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF4O60810 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF4O60810 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF4O60810 AC010542.4-201ENST00000563151 1910 ntBASIC20.86■□□□□ 0.93
PRAMEF4O60810 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF4O60810 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF4O60810 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.86■□□□□ 0.93
PRAMEF4O60810 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.86■□□□□ 0.93
PRAMEF4O60810 AC133561.4-201ENST00000566112 224 ntBASIC20.86■□□□□ 0.93
PRAMEF4O60810 AC106739.1-201ENST00000617035 715 ntBASIC20.86■□□□□ 0.93
PRAMEF4O60810 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
PRAMEF4O60810 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF4O60810 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF4O60810 FBXW4P1-201ENST00000426721 2239 ntBASIC20.86■□□□□ 0.93
PRAMEF4O60810 AC026471.6-201ENST00000622954 1905 ntBASIC20.86■□□□□ 0.93
PRAMEF4O60810 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF4O60810 CLDN5-201ENST00000403084 2357 ntBASIC20.86■□□□□ 0.93
PRAMEF4O60810 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF4O60810 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF4O60810 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF4O60810 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF4O60810 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRAMEF4O60810 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF4O60810 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF4O60810 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.85■□□□□ 0.93
PRAMEF4O60810 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEF4O60810 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF4O60810 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF4O60810 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF4O60810 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRAMEF4O60810 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEF4O60810 AC233992.3-201ENST00000607491 485 ntBASIC20.84■□□□□ 0.93
PRAMEF4O60810 AL031432.3-201ENST00000607698 485 ntBASIC20.84■□□□□ 0.93
PRAMEF4O60810 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.84■□□□□ 0.93
PRAMEF4O60810 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF4O60810 OR7E47P-201ENST00000546390 1422 ntBASIC20.84■□□□□ 0.93
PRAMEF4O60810 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF4O60810 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
PRAMEF4O60810 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF4O60810 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.83■□□□□ 0.92
PRAMEF4O60810 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF4O60810 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 AC087239.1-201ENST00000622671 572 ntBASIC20.82■□□□□ 0.92
PRAMEF4O60810 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEF4O60810 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF4O60810 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.81■□□□□ 0.92
PRAMEF4O60810 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PRAMEF4O60810 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF4O60810 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 AP001330.3-201ENST00000520123 633 ntBASIC20.81■□□□□ 0.92
PRAMEF4O60810 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF4O60810 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 AC008764.7-201ENST00000593779 1081 ntBASIC20.81■□□□□ 0.92
PRAMEF4O60810 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PRAMEF4O60810 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF4O60810 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF4O60810 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF4O60810 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms