Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SORBS3O60504 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.39■■□□□ 1.5
SORBS3O60504 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
SORBS3O60504 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SORBS3O60504 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SORBS3O60504 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.39■■□□□ 1.49
SORBS3O60504 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.39■■□□□ 1.49
SORBS3O60504 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.39■■□□□ 1.49
SORBS3O60504 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
SORBS3O60504 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SORBS3O60504 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SORBS3O60504 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SORBS3O60504 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SORBS3O60504 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.39■■□□□ 1.49
SORBS3O60504 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.38■■□□□ 1.49
SORBS3O60504 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SORBS3O60504 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SORBS3O60504 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SORBS3O60504 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SORBS3O60504 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SORBS3O60504 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SORBS3O60504 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SORBS3O60504 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.38■■□□□ 1.49
SORBS3O60504 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.38■■□□□ 1.49
SORBS3O60504 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.38■■□□□ 1.49
SORBS3O60504 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.37■■□□□ 1.49
SORBS3O60504 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.37■■□□□ 1.49
SORBS3O60504 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.37■■□□□ 1.49
SORBS3O60504 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SORBS3O60504 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.37■■□□□ 1.49
SORBS3O60504 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SORBS3O60504 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.36■■□□□ 1.49
SORBS3O60504 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.36■■□□□ 1.49
SORBS3O60504 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.36■■□□□ 1.49
SORBS3O60504 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SORBS3O60504 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.36■■□□□ 1.49
SORBS3O60504 AC080038.1-201ENST00000611274 1154 ntBASIC24.36■■□□□ 1.49
SORBS3O60504 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.36■■□□□ 1.49
SORBS3O60504 AC005224.4-201ENST00000583262 1652 ntBASIC24.36■■□□□ 1.49
SORBS3O60504 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SORBS3O60504 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
SORBS3O60504 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.35■■□□□ 1.49
SORBS3O60504 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SORBS3O60504 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SORBS3O60504 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SORBS3O60504 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.35■■□□□ 1.49
SORBS3O60504 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SORBS3O60504 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.35■■□□□ 1.49
SORBS3O60504 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SORBS3O60504 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SORBS3O60504 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SORBS3O60504 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SORBS3O60504 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SORBS3O60504 AC006015.1-201ENST00000429970 570 ntBASIC24.34■■□□□ 1.49
SORBS3O60504 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.34■■□□□ 1.49
SORBS3O60504 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.34■■□□□ 1.49
SORBS3O60504 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SORBS3O60504 C9orf163-202ENST00000624034 2573 ntBASIC24.34■■□□□ 1.49
SORBS3O60504 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
SORBS3O60504 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
SORBS3O60504 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SORBS3O60504 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SORBS3O60504 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
SORBS3O60504 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SORBS3O60504 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SORBS3O60504 AC079089.2-201ENST00000531211 1277 ntBASIC24.33■■□□□ 1.49
SORBS3O60504 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SORBS3O60504 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SORBS3O60504 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.33■■□□□ 1.49
SORBS3O60504 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.33■■□□□ 1.49
SORBS3O60504 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SORBS3O60504 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.33■■□□□ 1.49
SORBS3O60504 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
SORBS3O60504 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.33■■□□□ 1.48
SORBS3O60504 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SORBS3O60504 ESRRAP2-201ENST00000418437 1549 ntBASIC24.32■■□□□ 1.48
SORBS3O60504 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SORBS3O60504 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SORBS3O60504 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.32■■□□□ 1.48
SORBS3O60504 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.32■■□□□ 1.48
SORBS3O60504 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.32■■□□□ 1.48
SORBS3O60504 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SORBS3O60504 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SORBS3O60504 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms