Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPHS1O60500 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.08■□□□□ 0.97
NPHS1O60500 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.08■□□□□ 0.96
NPHS1O60500 AC133637.1-201ENST00000624115 1537 ntBASIC21.08■□□□□ 0.96
NPHS1O60500 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NPHS1O60500 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.08■□□□□ 0.96
NPHS1O60500 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPHS1O60500 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPHS1O60500 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPHS1O60500 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPHS1O60500 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.07■□□□□ 0.96
NPHS1O60500 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPHS1O60500 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NPHS1O60500 AL451085.2-201ENST00000605085 799 ntBASIC21.07■□□□□ 0.96
NPHS1O60500 MIR6724-1-201ENST00000616420 92 ntBASIC21.07■□□□□ 0.96
NPHS1O60500 MIR6724-2-201ENST00000616483 92 ntBASIC21.07■□□□□ 0.96
NPHS1O60500 MIR6724-4-201ENST00000617390 92 ntBASIC21.07■□□□□ 0.96
NPHS1O60500 MIR6724-3-201ENST00000622482 92 ntBASIC21.07■□□□□ 0.96
NPHS1O60500 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.07■□□□□ 0.96
NPHS1O60500 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
NPHS1O60500 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPHS1O60500 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPHS1O60500 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.06■□□□□ 0.96
NPHS1O60500 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.06■□□□□ 0.96
NPHS1O60500 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.06■□□□□ 0.96
NPHS1O60500 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.06■□□□□ 0.96
NPHS1O60500 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NPHS1O60500 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.06■□□□□ 0.96
NPHS1O60500 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.06■□□□□ 0.96
NPHS1O60500 FEM1AP4-201ENST00000443167 1987 ntBASIC21.06■□□□□ 0.96
NPHS1O60500 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPHS1O60500 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPHS1O60500 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPHS1O60500 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPHS1O60500 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPHS1O60500 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.05■□□□□ 0.96
NPHS1O60500 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NPHS1O60500 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NPHS1O60500 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPHS1O60500 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPHS1O60500 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPHS1O60500 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPHS1O60500 OR7E47P-201ENST00000546390 1422 ntBASIC21.04■□□□□ 0.96
NPHS1O60500 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
NPHS1O60500 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NPHS1O60500 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPHS1O60500 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
NPHS1O60500 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPHS1O60500 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPHS1O60500 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.04■□□□□ 0.96
NPHS1O60500 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.03■□□□□ 0.96
NPHS1O60500 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.03■□□□□ 0.96
NPHS1O60500 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.03■□□□□ 0.96
NPHS1O60500 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
NPHS1O60500 AC104564.3-201ENST00000582367 638 ntBASIC21.03■□□□□ 0.96
NPHS1O60500 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPHS1O60500 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPHS1O60500 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.03■□□□□ 0.96
NPHS1O60500 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
NPHS1O60500 AC026471.6-201ENST00000622954 1905 ntBASIC21.02■□□□□ 0.96
NPHS1O60500 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 AC009299.2-201ENST00000482477 511 ntBASIC21.02■□□□□ 0.96
NPHS1O60500 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.02■□□□□ 0.96
NPHS1O60500 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.02■□□□□ 0.96
NPHS1O60500 pRNA.6-201ENST00000610482 90 ntBASIC21.02■□□□□ 0.96
NPHS1O60500 pRNA.5-201ENST00000612139 90 ntBASIC21.02■□□□□ 0.96
NPHS1O60500 pRNA.11-201ENST00000618423 90 ntBASIC21.02■□□□□ 0.96
NPHS1O60500 pRNA.13-201ENST00000619112 90 ntBASIC21.02■□□□□ 0.96
NPHS1O60500 AC068587.7-201ENST00000641602 218 ntBASIC21.02■□□□□ 0.96
NPHS1O60500 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.02■□□□□ 0.96
NPHS1O60500 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPHS1O60500 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NPHS1O60500 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPHS1O60500 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NPHS1O60500 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
NPHS1O60500 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
NPHS1O60500 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms