Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
URB1O60287 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
URB1O60287 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.43■□□□□ 0.86
URB1O60287 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
URB1O60287 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.43■□□□□ 0.86
URB1O60287 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.43■□□□□ 0.86
URB1O60287 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.43■□□□□ 0.86
URB1O60287 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
URB1O60287 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
URB1O60287 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.42■□□□□ 0.86
URB1O60287 AC008550.1-201ENST00000511500 884 ntBASIC20.42■□□□□ 0.86
URB1O60287 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.42■□□□□ 0.86
URB1O60287 AC013268.1-206ENST00000638368 961 ntBASIC20.42■□□□□ 0.86
URB1O60287 AC112229.1-201ENST00000639295 961 ntBASIC20.42■□□□□ 0.86
URB1O60287 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
URB1O60287 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
URB1O60287 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
URB1O60287 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.42■□□□□ 0.86
URB1O60287 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
URB1O60287 AP001160.3-201ENST00000601484 763 ntBASIC20.42■□□□□ 0.86
URB1O60287 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.41■□□□□ 0.86
URB1O60287 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.41■□□□□ 0.86
URB1O60287 AC004687.1-201ENST00000579003 1625 ntBASIC20.41■□□□□ 0.86
URB1O60287 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
URB1O60287 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
URB1O60287 MIR1224-201ENST00000408193 85 ntBASIC20.41■□□□□ 0.86
URB1O60287 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.41■□□□□ 0.86
URB1O60287 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
URB1O60287 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
URB1O60287 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.4■□□□□ 0.86
URB1O60287 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.4■□□□□ 0.86
URB1O60287 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
URB1O60287 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.4■□□□□ 0.86
URB1O60287 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
URB1O60287 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.4■□□□□ 0.86
URB1O60287 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.4■□□□□ 0.86
URB1O60287 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.4■□□□□ 0.86
URB1O60287 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
URB1O60287 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.4■□□□□ 0.86
URB1O60287 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
URB1O60287 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
URB1O60287 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
URB1O60287 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
URB1O60287 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
URB1O60287 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.39■□□□□ 0.86
URB1O60287 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.39■□□□□ 0.86
URB1O60287 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.39■□□□□ 0.86
URB1O60287 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
URB1O60287 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.39■□□□□ 0.86
URB1O60287 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.39■□□□□ 0.86
URB1O60287 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
URB1O60287 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
URB1O60287 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
URB1O60287 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.39■□□□□ 0.85
URB1O60287 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
URB1O60287 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
URB1O60287 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.39■□□□□ 0.85
URB1O60287 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.39■□□□□ 0.85
URB1O60287 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.39■□□□□ 0.85
URB1O60287 AC010536.3-201ENST00000620306 533 ntBASIC20.39■□□□□ 0.85
URB1O60287 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
URB1O60287 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
URB1O60287 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
URB1O60287 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
URB1O60287 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.38■□□□□ 0.85
URB1O60287 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.38■□□□□ 0.85
URB1O60287 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.38■□□□□ 0.85
URB1O60287 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.38■□□□□ 0.85
URB1O60287 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.38■□□□□ 0.85
URB1O60287 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
URB1O60287 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
URB1O60287 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.38■□□□□ 0.85
URB1O60287 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
URB1O60287 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
URB1O60287 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
URB1O60287 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.38■□□□□ 0.85
URB1O60287 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.38■□□□□ 0.85
URB1O60287 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.38■□□□□ 0.85
URB1O60287 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
URB1O60287 AC009237.3-201ENST00000393279 1427 ntBASIC20.37■□□□□ 0.85
URB1O60287 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
URB1O60287 AC068338.2-201ENST00000563278 1430 ntBASIC20.37■□□□□ 0.85
URB1O60287 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
URB1O60287 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.37■□□□□ 0.85
URB1O60287 ECEL1P3-201ENST00000427961 737 ntBASIC20.37■□□□□ 0.85
URB1O60287 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.37■□□□□ 0.85
URB1O60287 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms