Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RIPK2O43353 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIPK2O43353 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RIPK2O43353 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RIPK2O43353 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
RIPK2O43353 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.96■■□□□ 1.11
RIPK2O43353 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIPK2O43353 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.96■■□□□ 1.11
RIPK2O43353 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.96■■□□□ 1.11
RIPK2O43353 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RIPK2O43353 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.96■■□□□ 1.11
RIPK2O43353 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.96■■□□□ 1.11
RIPK2O43353 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIPK2O43353 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.96■■□□□ 1.11
RIPK2O43353 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.96■■□□□ 1.11
RIPK2O43353 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.96■■□□□ 1.11
RIPK2O43353 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.96■■□□□ 1.11
RIPK2O43353 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIPK2O43353 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.95■■□□□ 1.11
RIPK2O43353 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK2O43353 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
RIPK2O43353 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK2O43353 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
RIPK2O43353 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.95■■□□□ 1.1
RIPK2O43353 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RIPK2O43353 AC026471.6-201ENST00000622954 1905 ntBASIC21.95■■□□□ 1.1
RIPK2O43353 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIPK2O43353 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.95■■□□□ 1.1
RIPK2O43353 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
RIPK2O43353 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.94■■□□□ 1.1
RIPK2O43353 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.94■■□□□ 1.1
RIPK2O43353 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 LINC01521-201ENST00000504184 1943 ntBASIC21.94■■□□□ 1.1
RIPK2O43353 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RIPK2O43353 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
RIPK2O43353 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK2O43353 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK2O43353 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK2O43353 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK2O43353 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK2O43353 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RIPK2O43353 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.93■■□□□ 1.1
RIPK2O43353 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RIPK2O43353 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RIPK2O43353 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RIPK2O43353 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.93■■□□□ 1.1
RIPK2O43353 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK2O43353 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK2O43353 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RIPK2O43353 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.92■■□□□ 1.1
RIPK2O43353 AC021242.3-201ENST00000607598 1377 ntBASIC21.92■■□□□ 1.1
RIPK2O43353 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK2O43353 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.92■■□□□ 1.1
RIPK2O43353 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.92■■□□□ 1.1
RIPK2O43353 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RIPK2O43353 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK2O43353 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK2O43353 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK2O43353 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RIPK2O43353 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIPK2O43353 C17orf82-201ENST00000623772 1530 ntBASIC21.9■■□□□ 1.1
RIPK2O43353 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
RIPK2O43353 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RIPK2O43353 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RIPK2O43353 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.9■■□□□ 1.1
RIPK2O43353 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.9■■□□□ 1.1
RIPK2O43353 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.9■■□□□ 1.1
RIPK2O43353 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RIPK2O43353 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.9■■□□□ 1.1
RIPK2O43353 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.9■■□□□ 1.1
RIPK2O43353 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIPK2O43353 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RIPK2O43353 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.9■■□□□ 1.1
RIPK2O43353 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RIPK2O43353 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.89■■□□□ 1.1
RIPK2O43353 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RIPK2O43353 KRT8P33-201ENST00000508125 1423 ntBASIC21.89■■□□□ 1.1
RIPK2O43353 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK2O43353 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK2O43353 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms