Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 AC055733.4-201ENST00000638462 1354 ntBASIC20.93■□□□□ 0.94
CNOT1A5YKK6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 AC091874.3-201ENST00000512672 1195 ntBASIC20.93■□□□□ 0.94
CNOT1A5YKK6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.93■□□□□ 0.94
CNOT1A5YKK6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 BX276092.2-201ENST00000417668 665 ntBASIC20.92■□□□□ 0.94
CNOT1A5YKK6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.92■□□□□ 0.94
CNOT1A5YKK6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 AL512625.2-201ENST00000417533 625 ntBASIC20.91■□□□□ 0.94
CNOT1A5YKK6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 MIR4497-201ENST00000583208 89 ntBASIC20.91■□□□□ 0.94
CNOT1A5YKK6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.91■□□□□ 0.94
CNOT1A5YKK6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 AC010331.1-201ENST00000611423 582 ntBASIC20.9■□□□□ 0.94
CNOT1A5YKK6 AC008694.1-202ENST00000636953 945 ntBASIC20.9■□□□□ 0.94
CNOT1A5YKK6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 MIR718-201ENST00000390190 70 ntBASIC20.9■□□□□ 0.94
CNOT1A5YKK6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 AC010141.2-201ENST00000452426 721 ntBASIC20.9■□□□□ 0.94
CNOT1A5YKK6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 AC073648.6-201ENST00000641589 218 ntBASIC20.9■□□□□ 0.94
CNOT1A5YKK6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT1A5YKK6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNOT1A5YKK6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNOT1A5YKK6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNOT1A5YKK6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNOT1A5YKK6 MIPEPP3-201ENST00000412105 444 ntBASIC20.89■□□□□ 0.94
CNOT1A5YKK6 AC007322.4-201ENST00000509611 723 ntBASIC20.89■□□□□ 0.94
CNOT1A5YKK6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CNOT1A5YKK6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.89■□□□□ 0.93
CNOT1A5YKK6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.89■□□□□ 0.93
CNOT1A5YKK6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CNOT1A5YKK6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CNOT1A5YKK6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT1A5YKK6 AP003097.1-201ENST00000530657 1135 ntBASIC20.88■□□□□ 0.93
CNOT1A5YKK6 LINC01023-201ENST00000606054 436 ntBASIC20.88■□□□□ 0.93
CNOT1A5YKK6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.88■□□□□ 0.93
CNOT1A5YKK6 OR10C1-204ENST00000622521 1039 ntBASIC20.88■□□□□ 0.93
CNOT1A5YKK6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.88■□□□□ 0.93
CNOT1A5YKK6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT1A5YKK6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
CNOT1A5YKK6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.88■□□□□ 0.93
CNOT1A5YKK6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT1A5YKK6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 UBE2SP1-201ENST00000450587 669 ntBASIC20.87■□□□□ 0.93
CNOT1A5YKK6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.87■□□□□ 0.93
CNOT1A5YKK6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT1A5YKK6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms