Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 BID-214ENST00000617586 542 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3EA0A087X179 ID1-201ENST00000376105 1233 ntBASIC21.56■■□□□ 1.04
TBC1D3EA0A087X179 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.56■■□□□ 1.04
TBC1D3EA0A087X179 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3EA0A087X179 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3EA0A087X179 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.56■■□□□ 1.04
TBC1D3EA0A087X179 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3EA0A087X179 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3EA0A087X179 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 AC073111.5-205ENST00000641717 521 ntBASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3EA0A087X179 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 KRT87P-202ENST00000534226 1464 ntBASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 KRT18P11-201ENST00000435214 1283 ntBASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 CDCA4P2-201ENST00000441182 718 ntBASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 AC104187.1-201ENST00000607510 612 ntBASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 OR7E47P-201ENST00000546390 1422 ntBASIC21.53■■□□□ 1.04
TBC1D3EA0A087X179 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3EA0A087X179 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TBC1D3EA0A087X179 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 DUSP8P5-201ENST00000422884 1815 ntBASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3EA0A087X179 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 AC026185.1-201ENST00000445748 174 ntBASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 AC011767.1-201ENST00000617410 1153 ntBASIC21.5■■□□□ 1.03
TBC1D3EA0A087X179 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms