Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NcdnQ9Z0E0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NcdnQ9Z0E0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NcdnQ9Z0E0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NcdnQ9Z0E0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
NcdnQ9Z0E0 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.8■■□□□ 1.72
NcdnQ9Z0E0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NcdnQ9Z0E0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NcdnQ9Z0E0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.77■■□□□ 1.72
NcdnQ9Z0E0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.76■■□□□ 1.71
NcdnQ9Z0E0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
NcdnQ9Z0E0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NcdnQ9Z0E0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NcdnQ9Z0E0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NcdnQ9Z0E0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NcdnQ9Z0E0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.73■■□□□ 1.71
NcdnQ9Z0E0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.72■■□□□ 1.71
NcdnQ9Z0E0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NcdnQ9Z0E0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
NcdnQ9Z0E0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
NcdnQ9Z0E0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NcdnQ9Z0E0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.69■■□□□ 1.7
NcdnQ9Z0E0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
NcdnQ9Z0E0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.68■■□□□ 1.7
NcdnQ9Z0E0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.68■■□□□ 1.7
NcdnQ9Z0E0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NcdnQ9Z0E0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NcdnQ9Z0E0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NcdnQ9Z0E0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.66■■□□□ 1.7
NcdnQ9Z0E0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NcdnQ9Z0E0 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.64■■□□□ 1.7
NcdnQ9Z0E0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NcdnQ9Z0E0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.63■■□□□ 1.69
NcdnQ9Z0E0 Gm7432-201ENSMUST00000210343 879 ntBASIC25.63■■□□□ 1.69
NcdnQ9Z0E0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NcdnQ9Z0E0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
NcdnQ9Z0E0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NcdnQ9Z0E0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NcdnQ9Z0E0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NcdnQ9Z0E0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NcdnQ9Z0E0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
NcdnQ9Z0E0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
NcdnQ9Z0E0 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.56■■□□□ 1.68
NcdnQ9Z0E0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NcdnQ9Z0E0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
NcdnQ9Z0E0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NcdnQ9Z0E0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NcdnQ9Z0E0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
NcdnQ9Z0E0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.53■■□□□ 1.68
NcdnQ9Z0E0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
NcdnQ9Z0E0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NcdnQ9Z0E0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
NcdnQ9Z0E0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.52■■□□□ 1.68
NcdnQ9Z0E0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
NcdnQ9Z0E0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NcdnQ9Z0E0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NcdnQ9Z0E0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.5■■□□□ 1.67
NcdnQ9Z0E0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NcdnQ9Z0E0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.48■■□□□ 1.67
NcdnQ9Z0E0 Nkain2-201ENSMUST00000092602 558 ntBASIC25.48■■□□□ 1.67
NcdnQ9Z0E0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
NcdnQ9Z0E0 Mir6538-201ENSMUST00000183713 110 ntBASIC25.46■■□□□ 1.67
NcdnQ9Z0E0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
NcdnQ9Z0E0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
NcdnQ9Z0E0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
NcdnQ9Z0E0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
NcdnQ9Z0E0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.41■■□□□ 1.66
NcdnQ9Z0E0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
NcdnQ9Z0E0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NcdnQ9Z0E0 Gm11599-201ENSMUST00000118720 878 ntBASIC25.39■■□□□ 1.66
NcdnQ9Z0E0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NcdnQ9Z0E0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.38■■□□□ 1.65
NcdnQ9Z0E0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NcdnQ9Z0E0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NcdnQ9Z0E0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.37■■□□□ 1.65
NcdnQ9Z0E0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NcdnQ9Z0E0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NcdnQ9Z0E0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
NcdnQ9Z0E0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.35■■□□□ 1.65
NcdnQ9Z0E0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NcdnQ9Z0E0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
NcdnQ9Z0E0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
NcdnQ9Z0E0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NcdnQ9Z0E0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.29■■□□□ 1.64
NcdnQ9Z0E0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.28■■□□□ 1.64
NcdnQ9Z0E0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
NcdnQ9Z0E0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NcdnQ9Z0E0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
NcdnQ9Z0E0 Cap2-205ENSMUST00000225824 1634 ntBASIC25.26■■□□□ 1.63
NcdnQ9Z0E0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NcdnQ9Z0E0 Gm11175-201ENSMUST00000116172 543 ntBASIC25.25■■□□□ 1.63
NcdnQ9Z0E0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NcdnQ9Z0E0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
NcdnQ9Z0E0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NcdnQ9Z0E0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
NcdnQ9Z0E0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
NcdnQ9Z0E0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
NcdnQ9Z0E0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.22■■□□□ 1.63
NcdnQ9Z0E0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NcdnQ9Z0E0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms