Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.54■■□□□ 1.2
Swsap1Q8VCI7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Swsap1Q8VCI7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Swsap1Q8VCI7 Zxda-201ENSMUST00000117281 2621 ntBASIC22.52■■□□□ 1.2
Swsap1Q8VCI7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.52■■□□□ 1.2
Swsap1Q8VCI7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.51■■□□□ 1.19
Swsap1Q8VCI7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Swsap1Q8VCI7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Swsap1Q8VCI7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.51■■□□□ 1.19
Swsap1Q8VCI7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Swsap1Q8VCI7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Swsap1Q8VCI7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Swsap1Q8VCI7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Swsap1Q8VCI7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Swsap1Q8VCI7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.48■■□□□ 1.19
Swsap1Q8VCI7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Swsap1Q8VCI7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Swsap1Q8VCI7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Swsap1Q8VCI7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.46■■□□□ 1.19
Swsap1Q8VCI7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Swsap1Q8VCI7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Swsap1Q8VCI7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Swsap1Q8VCI7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Swsap1Q8VCI7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Swsap1Q8VCI7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Swsap1Q8VCI7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
Swsap1Q8VCI7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Swsap1Q8VCI7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.4■■□□□ 1.18
Swsap1Q8VCI7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Swsap1Q8VCI7 Gm45855-201ENSMUST00000212546 880 ntBASIC22.39■■□□□ 1.17
Swsap1Q8VCI7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Swsap1Q8VCI7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.38■■□□□ 1.17
Swsap1Q8VCI7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Swsap1Q8VCI7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Swsap1Q8VCI7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Swsap1Q8VCI7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Swsap1Q8VCI7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Swsap1Q8VCI7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Swsap1Q8VCI7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Swsap1Q8VCI7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Swsap1Q8VCI7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.36■■□□□ 1.17
Swsap1Q8VCI7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Swsap1Q8VCI7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Swsap1Q8VCI7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Swsap1Q8VCI7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Swsap1Q8VCI7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Swsap1Q8VCI7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Swsap1Q8VCI7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Swsap1Q8VCI7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Swsap1Q8VCI7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Swsap1Q8VCI7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.33■■□□□ 1.17
Swsap1Q8VCI7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Swsap1Q8VCI7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Swsap1Q8VCI7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Swsap1Q8VCI7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Swsap1Q8VCI7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Swsap1Q8VCI7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Swsap1Q8VCI7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Swsap1Q8VCI7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Swsap1Q8VCI7 Gm9397-201ENSMUST00000200125 605 ntBASIC22.28■■□□□ 1.16
Swsap1Q8VCI7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Swsap1Q8VCI7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Swsap1Q8VCI7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Swsap1Q8VCI7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Swsap1Q8VCI7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Swsap1Q8VCI7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Swsap1Q8VCI7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Swsap1Q8VCI7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Swsap1Q8VCI7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Swsap1Q8VCI7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.23■■□□□ 1.15
Swsap1Q8VCI7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Swsap1Q8VCI7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Swsap1Q8VCI7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Swsap1Q8VCI7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Swsap1Q8VCI7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.21■■□□□ 1.15
Swsap1Q8VCI7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.21■■□□□ 1.15
Swsap1Q8VCI7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Swsap1Q8VCI7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.21■■□□□ 1.15
Swsap1Q8VCI7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Swsap1Q8VCI7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Swsap1Q8VCI7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Swsap1Q8VCI7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Swsap1Q8VCI7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Swsap1Q8VCI7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Swsap1Q8VCI7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.17■■□□□ 1.14
Swsap1Q8VCI7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.16■■□□□ 1.14
Swsap1Q8VCI7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.15■■□□□ 1.14
Swsap1Q8VCI7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Swsap1Q8VCI7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Swsap1Q8VCI7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Swsap1Q8VCI7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Swsap1Q8VCI7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Swsap1Q8VCI7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.12■■□□□ 1.13
Swsap1Q8VCI7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Swsap1Q8VCI7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Swsap1Q8VCI7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Swsap1Q8VCI7 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.11■■□□□ 1.13
Swsap1Q8VCI7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Swsap1Q8VCI7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Swsap1Q8VCI7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms