Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32,5■■■□□ 2,79
Col23a1Q8K4G2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32,48■■■□□ 2,79
Col23a1Q8K4G2 Gm43863-201ENSMUST00000203822 1192 ntBASIC32,48■■■□□ 2,79
Col23a1Q8K4G2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32,47■■■□□ 2,79
Col23a1Q8K4G2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32,46■■■□□ 2,79
Col23a1Q8K4G2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32,42■■■□□ 2,78
Col23a1Q8K4G2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32,41■■■□□ 2,78
Col23a1Q8K4G2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32,39■■■□□ 2,78
Col23a1Q8K4G2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32,37■■■□□ 2,77
Col23a1Q8K4G2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32,33■■■□□ 2,77
Col23a1Q8K4G2 Gm42809-201ENSMUST00000198429 1138 ntBASIC32,33■■■□□ 2,77
Col23a1Q8K4G2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32,32■■■□□ 2,76
Col23a1Q8K4G2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32,32■■■□□ 2,76
Col23a1Q8K4G2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32,32■■■□□ 2,76
Col23a1Q8K4G2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32,31■■■□□ 2,76
Col23a1Q8K4G2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32,29■■■□□ 2,76
Col23a1Q8K4G2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Col23a1Q8K4G2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32,27■■■□□ 2,76
Col23a1Q8K4G2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Col23a1Q8K4G2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32,26■■■□□ 2,75
Col23a1Q8K4G2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32,25■■■□□ 2,75
Col23a1Q8K4G2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Col23a1Q8K4G2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32,24■■■□□ 2,75
Col23a1Q8K4G2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32,24■■■□□ 2,75
Col23a1Q8K4G2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32,23■■■□□ 2,75
Col23a1Q8K4G2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32,22■■■□□ 2,75
Col23a1Q8K4G2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC32,21■■■□□ 2,75
Col23a1Q8K4G2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32,2■■■□□ 2,74
Col23a1Q8K4G2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32,19■■■□□ 2,74
Col23a1Q8K4G2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32,18■■■□□ 2,74
Col23a1Q8K4G2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32,18■■■□□ 2,74
Col23a1Q8K4G2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32,15■■■□□ 2,74
Col23a1Q8K4G2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,15■■■□□ 2,74
Col23a1Q8K4G2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32,15■■■□□ 2,74
Col23a1Q8K4G2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32,15■■■□□ 2,74
Col23a1Q8K4G2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32,15■■■□□ 2,74
Col23a1Q8K4G2 AC157572.2-201ENSMUST00000226970 908 ntBASIC32,15■■■□□ 2,74
Col23a1Q8K4G2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32,12■■■□□ 2,73
Col23a1Q8K4G2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32,11■■■□□ 2,73
Col23a1Q8K4G2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32,09■■■□□ 2,73
Col23a1Q8K4G2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32,09■■■□□ 2,73
Col23a1Q8K4G2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32,08■■■□□ 2,73
Col23a1Q8K4G2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,07■■■□□ 2,72
Col23a1Q8K4G2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32,05■■■□□ 2,72
Col23a1Q8K4G2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32,05■■■□□ 2,72
Col23a1Q8K4G2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32,05■■■□□ 2,72
Col23a1Q8K4G2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32,04■■■□□ 2,72
Col23a1Q8K4G2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32,03■■■□□ 2,72
Col23a1Q8K4G2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32,03■■■□□ 2,72
Col23a1Q8K4G2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC32,02■■■□□ 2,72
Col23a1Q8K4G2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,72
Col23a1Q8K4G2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,71
Col23a1Q8K4G2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Col23a1Q8K4G2 Gm7432-201ENSMUST00000210343 879 ntBASIC32■■■□□ 2,71
Col23a1Q8K4G2 Nkain2-201ENSMUST00000092602 558 ntBASIC31,99■■■□□ 2,71
Col23a1Q8K4G2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31,98■■■□□ 2,71
Col23a1Q8K4G2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Col23a1Q8K4G2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31,97■■■□□ 2,71
Col23a1Q8K4G2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31,97■■■□□ 2,71
Col23a1Q8K4G2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31,96■■■□□ 2,71
Col23a1Q8K4G2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31,95■■■□□ 2,71
Col23a1Q8K4G2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31,94■■■□□ 2,7
Col23a1Q8K4G2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31,93■■■□□ 2,7
Col23a1Q8K4G2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31,91■■■□□ 2,7
Col23a1Q8K4G2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31,91■■■□□ 2,7
Col23a1Q8K4G2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Col23a1Q8K4G2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31,87■■■□□ 2,69
Col23a1Q8K4G2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Col23a1Q8K4G2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Col23a1Q8K4G2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31,85■■■□□ 2,69
Col23a1Q8K4G2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31,84■■■□□ 2,69
Col23a1Q8K4G2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31,84■■■□□ 2,69
Col23a1Q8K4G2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31,84■■■□□ 2,69
Col23a1Q8K4G2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31,83■■■□□ 2,69
Col23a1Q8K4G2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31,82■■■□□ 2,68
Col23a1Q8K4G2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31,82■■■□□ 2,68
Col23a1Q8K4G2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31,81■■■□□ 2,68
Col23a1Q8K4G2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31,81■■■□□ 2,68
Col23a1Q8K4G2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31,81■■■□□ 2,68
Col23a1Q8K4G2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31,8■■■□□ 2,68
Col23a1Q8K4G2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31,8■■■□□ 2,68
Col23a1Q8K4G2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31,8■■■□□ 2,68
Col23a1Q8K4G2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31,8■■■□□ 2,68
Col23a1Q8K4G2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31,79■■■□□ 2,68
Col23a1Q8K4G2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31,79■■■□□ 2,68
Col23a1Q8K4G2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31,79■■■□□ 2,68
Col23a1Q8K4G2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,78■■■□□ 2,68
Col23a1Q8K4G2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31,78■■■□□ 2,68
Col23a1Q8K4G2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31,78■■■□□ 2,68
Col23a1Q8K4G2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,77■■■□□ 2,68
Col23a1Q8K4G2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31,76■■■□□ 2,67
Col23a1Q8K4G2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Col23a1Q8K4G2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Col23a1Q8K4G2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31,74■■■□□ 2,67
Col23a1Q8K4G2 Gm11599-201ENSMUST00000118720 878 ntBASIC31,73■■■□□ 2,67
Col23a1Q8K4G2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Col23a1Q8K4G2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31,72■■■□□ 2,67
Col23a1Q8K4G2 Gm11175-201ENSMUST00000116172 543 ntBASIC31,72■■■□□ 2,67
Col23a1Q8K4G2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31,7■■■□□ 2,67
Col23a1Q8K4G2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Retrieved 100 of 76,532 protein–RNA pairs in 18,6 ms