Protein–RNA interactions for Protein: Q80YS6

Afap1, Actin filament-associated protein 1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Afap1Q80YS6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC37,98■■■■□ 3,67
Afap1Q80YS6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC37,97■■■■□ 3,67
Afap1Q80YS6 Gm43863-201ENSMUST00000203822 1192 ntBASIC37,97■■■■□ 3,67
Afap1Q80YS6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC37,95■■■■□ 3,67
Afap1Q80YS6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC37,94■■■■□ 3,66
Afap1Q80YS6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC37,93■■■■□ 3,66
Afap1Q80YS6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC37,92■■■■□ 3,66
Afap1Q80YS6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC37,89■■■■□ 3,66
Afap1Q80YS6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC37,85■■■■□ 3,65
Afap1Q80YS6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC37,85■■■■□ 3,65
Afap1Q80YS6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC37,84■■■■□ 3,65
Afap1Q80YS6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC37,84■■■■□ 3,65
Afap1Q80YS6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC37,82■■■■□ 3,65
Afap1Q80YS6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC37,81■■■■□ 3,64
Afap1Q80YS6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC37,8■■■■□ 3,64
Afap1Q80YS6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC37,8■■■■□ 3,64
Afap1Q80YS6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC37,79■■■■□ 3,64
Afap1Q80YS6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC37,78■■■■□ 3,64
Afap1Q80YS6 Gm42809-201ENSMUST00000198429 1138 ntBASIC37,78■■■■□ 3,64
Afap1Q80YS6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC37,75■■■■□ 3,63
Afap1Q80YS6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC37,73■■■■□ 3,63
Afap1Q80YS6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC37,73■■■■□ 3,63
Afap1Q80YS6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC37,72■■■■□ 3,63
Afap1Q80YS6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC37,72■■■■□ 3,63
Afap1Q80YS6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC37,7■■■■□ 3,63
Afap1Q80YS6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC37,68■■■■□ 3,62
Afap1Q80YS6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC37,66■■■■□ 3,62
Afap1Q80YS6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC37,65■■■■□ 3,62
Afap1Q80YS6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC37,63■■■■□ 3,61
Afap1Q80YS6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC37,62■■■■□ 3,61
Afap1Q80YS6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC37,6■■■■□ 3,61
Afap1Q80YS6 AC157572.2-201ENSMUST00000226970 908 ntBASIC37,6■■■■□ 3,61
Afap1Q80YS6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC37,6■■■■□ 3,61
Afap1Q80YS6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC37,6■■■■□ 3,61
Afap1Q80YS6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC37,6■■■■□ 3,61
Afap1Q80YS6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC37,59■■■■□ 3,61
Afap1Q80YS6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC37,59■■■■□ 3,61
Afap1Q80YS6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC37,56■■■■□ 3,6
Afap1Q80YS6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC37,56■■■■□ 3,6
Afap1Q80YS6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC37,56■■■■□ 3,6
Afap1Q80YS6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC37,55■■■■□ 3,6
Afap1Q80YS6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC37,55■■■■□ 3,6
Afap1Q80YS6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC37,55■■■■□ 3,6
Afap1Q80YS6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC37,52■■■■□ 3,6
Afap1Q80YS6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC37,51■■■■□ 3,6
Afap1Q80YS6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC37,51■■■■□ 3,6
Afap1Q80YS6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37,5■■■■□ 3,59
Afap1Q80YS6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC37,49■■■■□ 3,59
Afap1Q80YS6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Afap1Q80YS6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC37,45■■■■□ 3,59
Afap1Q80YS6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC37,45■■■■□ 3,59
Afap1Q80YS6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC37,45■■■■□ 3,59
Afap1Q80YS6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC37,42■■■■□ 3,58
Afap1Q80YS6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC37,41■■■■□ 3,58
Afap1Q80YS6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC37,4■■■■□ 3,58
Afap1Q80YS6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC37,38■■■■□ 3,58
Afap1Q80YS6 Nkain2-201ENSMUST00000092602 558 ntBASIC37,38■■■■□ 3,57
Afap1Q80YS6 Gm7432-201ENSMUST00000210343 879 ntBASIC37,37■■■■□ 3,57
Afap1Q80YS6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC37,37■■■■□ 3,57
Afap1Q80YS6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC37,36■■■■□ 3,57
Afap1Q80YS6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC37,35■■■■□ 3,57
Afap1Q80YS6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC37,34■■■■□ 3,57
Afap1Q80YS6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC37,34■■■■□ 3,57
Afap1Q80YS6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC37,34■■■■□ 3,57
Afap1Q80YS6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37,34■■■■□ 3,57
Afap1Q80YS6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC37,33■■■■□ 3,57
Afap1Q80YS6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC37,33■■■■□ 3,57
Afap1Q80YS6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC37,32■■■■□ 3,56
Afap1Q80YS6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC37,32■■■■□ 3,56
Afap1Q80YS6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC37,3■■■■□ 3,56
Afap1Q80YS6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC37,29■■■■□ 3,56
Afap1Q80YS6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC37,28■■■■□ 3,56
Afap1Q80YS6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC37,27■■■■□ 3,56
Afap1Q80YS6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC37,26■■■■□ 3,56
Afap1Q80YS6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC37,25■■■■□ 3,55
Afap1Q80YS6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC37,25■■■■□ 3,55
Afap1Q80YS6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC37,23■■■■□ 3,55
Afap1Q80YS6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC37,23■■■■□ 3,55
Afap1Q80YS6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC37,22■■■■□ 3,55
Afap1Q80YS6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC37,22■■■■□ 3,55
Afap1Q80YS6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC37,22■■■■□ 3,55
Afap1Q80YS6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC37,19■■■■□ 3,54
Afap1Q80YS6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC37,18■■■■□ 3,54
Afap1Q80YS6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC37,18■■■■□ 3,54
Afap1Q80YS6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC37,18■■■■□ 3,54
Afap1Q80YS6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC37,17■■■■□ 3,54
Afap1Q80YS6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC37,16■■■■□ 3,54
Afap1Q80YS6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC37,15■■■■□ 3,54
Afap1Q80YS6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC37,14■■■■□ 3,54
Afap1Q80YS6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC37,12■■■■□ 3,53
Afap1Q80YS6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC37,12■■■■□ 3,53
Afap1Q80YS6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC37,12■■■■□ 3,53
Afap1Q80YS6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC37,11■■■■□ 3,53
Afap1Q80YS6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC37,11■■■■□ 3,53
Afap1Q80YS6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC37,11■■■■□ 3,53
Afap1Q80YS6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37,1■■■■□ 3,53
Afap1Q80YS6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC37,1■■■■□ 3,53
Afap1Q80YS6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC37,09■■■■□ 3,53
Afap1Q80YS6 Gm11599-201ENSMUST00000118720 878 ntBASIC37,06■■■■□ 3,52
Afap1Q80YS6 Gm11175-201ENSMUST00000116172 543 ntBASIC37,05■■■■□ 3,52
Retrieved 100 of 76,532 protein–RNA pairs in 16,5 ms