Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23,22■■□□□ 1,31
Ubr5Q80TP3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23,21■■□□□ 1,31
Ubr5Q80TP3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23,21■■□□□ 1,31
Ubr5Q80TP3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23,18■■□□□ 1,3
Ubr5Q80TP3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Ubr5Q80TP3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23,18■■□□□ 1,3
Ubr5Q80TP3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23,16■■□□□ 1,3
Ubr5Q80TP3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23,14■■□□□ 1,29
Ubr5Q80TP3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23,13■■□□□ 1,29
Ubr5Q80TP3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23,13■■□□□ 1,29
Ubr5Q80TP3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23,13■■□□□ 1,29
Ubr5Q80TP3 Gm43863-201ENSMUST00000203822 1192 ntBASIC23,12■■□□□ 1,29
Ubr5Q80TP3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23,11■■□□□ 1,29
Ubr5Q80TP3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23,11■■□□□ 1,29
Ubr5Q80TP3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Ubr5Q80TP3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23,09■■□□□ 1,29
Ubr5Q80TP3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23,08■■□□□ 1,29
Ubr5Q80TP3 Gm7432-201ENSMUST00000210343 879 ntBASIC23,08■■□□□ 1,29
Ubr5Q80TP3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23,08■■□□□ 1,29
Ubr5Q80TP3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23,07■■□□□ 1,28
Ubr5Q80TP3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23,06■■□□□ 1,28
Ubr5Q80TP3 Mir6538-201ENSMUST00000183713 110 ntBASIC23,06■■□□□ 1,28
Ubr5Q80TP3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Ubr5Q80TP3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23,03■■□□□ 1,28
Ubr5Q80TP3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23,03■■□□□ 1,28
Ubr5Q80TP3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23,03■■□□□ 1,28
Ubr5Q80TP3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23,02■■□□□ 1,28
Ubr5Q80TP3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23,02■■□□□ 1,28
Ubr5Q80TP3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23,02■■□□□ 1,28
Ubr5Q80TP3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23,02■■□□□ 1,28
Ubr5Q80TP3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23,01■■□□□ 1,27
Ubr5Q80TP3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23,01■■□□□ 1,27
Ubr5Q80TP3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23■■□□□ 1,27
Ubr5Q80TP3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22,99■■□□□ 1,27
Ubr5Q80TP3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22,99■■□□□ 1,27
Ubr5Q80TP3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22,99■■□□□ 1,27
Ubr5Q80TP3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Ubr5Q80TP3 AC157572.2-201ENSMUST00000226970 908 ntBASIC22,97■■□□□ 1,27
Ubr5Q80TP3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,96■■□□□ 1,27
Ubr5Q80TP3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22,95■■□□□ 1,26
Ubr5Q80TP3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22,94■■□□□ 1,26
Ubr5Q80TP3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22,94■■□□□ 1,26
Ubr5Q80TP3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22,91■■□□□ 1,26
Ubr5Q80TP3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22,91■■□□□ 1,26
Ubr5Q80TP3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Ubr5Q80TP3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22,91■■□□□ 1,26
Ubr5Q80TP3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22,9■■□□□ 1,26
Ubr5Q80TP3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22,9■■□□□ 1,26
Ubr5Q80TP3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,9■■□□□ 1,26
Ubr5Q80TP3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,25
Ubr5Q80TP3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22,88■■□□□ 1,25
Ubr5Q80TP3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22,88■■□□□ 1,25
Ubr5Q80TP3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Ubr5Q80TP3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Ubr5Q80TP3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22,87■■□□□ 1,25
Ubr5Q80TP3 Gm11175-201ENSMUST00000116172 543 ntBASIC22,86■■□□□ 1,25
Ubr5Q80TP3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22,85■■□□□ 1,25
Ubr5Q80TP3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22,84■■□□□ 1,25
Ubr5Q80TP3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22,84■■□□□ 1,25
Ubr5Q80TP3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22,84■■□□□ 1,25
Ubr5Q80TP3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,84■■□□□ 1,25
Ubr5Q80TP3 Gm11599-201ENSMUST00000118720 878 ntBASIC22,84■■□□□ 1,25
Ubr5Q80TP3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Ubr5Q80TP3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,24
Ubr5Q80TP3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22,83■■□□□ 1,24
Ubr5Q80TP3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22,82■■□□□ 1,24
Ubr5Q80TP3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22,82■■□□□ 1,24
Ubr5Q80TP3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ubr5Q80TP3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ubr5Q80TP3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ubr5Q80TP3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ubr5Q80TP3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22,8■■□□□ 1,24
Ubr5Q80TP3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22,79■■□□□ 1,24
Ubr5Q80TP3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22,78■■□□□ 1,24
Ubr5Q80TP3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Ubr5Q80TP3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22,78■■□□□ 1,24
Ubr5Q80TP3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22,77■■□□□ 1,24
Ubr5Q80TP3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22,77■■□□□ 1,24
Ubr5Q80TP3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22,75■■□□□ 1,23
Ubr5Q80TP3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22,75■■□□□ 1,23
Ubr5Q80TP3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Ubr5Q80TP3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22,73■■□□□ 1,23
Ubr5Q80TP3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22,73■■□□□ 1,23
Ubr5Q80TP3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22,73■■□□□ 1,23
Ubr5Q80TP3 Nkain2-201ENSMUST00000092602 558 ntBASIC22,73■■□□□ 1,23
Ubr5Q80TP3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Ubr5Q80TP3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22,7■■□□□ 1,22
Ubr5Q80TP3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22,7■■□□□ 1,22
Ubr5Q80TP3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Ubr5Q80TP3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22,69■■□□□ 1,22
Ubr5Q80TP3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Ubr5Q80TP3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22,67■■□□□ 1,22
Ubr5Q80TP3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22,67■■□□□ 1,22
Ubr5Q80TP3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22,67■■□□□ 1,22
Ubr5Q80TP3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22,67■■□□□ 1,22
Ubr5Q80TP3 Cap2-205ENSMUST00000225824 1634 ntBASIC22,67■■□□□ 1,22
Ubr5Q80TP3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22,67■■□□□ 1,22
Ubr5Q80TP3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22,67■■□□□ 1,22
Ubr5Q80TP3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Ubr5Q80TP3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms