Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.97■■■□□ 2.23
ShbQ6PD21 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
ShbQ6PD21 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
ShbQ6PD21 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.94■■■□□ 2.22
ShbQ6PD21 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
ShbQ6PD21 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.93■■■□□ 2.22
ShbQ6PD21 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ShbQ6PD21 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
ShbQ6PD21 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
ShbQ6PD21 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
ShbQ6PD21 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
ShbQ6PD21 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.84■■■□□ 2.21
ShbQ6PD21 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ShbQ6PD21 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ShbQ6PD21 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.83■■■□□ 2.21
ShbQ6PD21 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ShbQ6PD21 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ShbQ6PD21 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
ShbQ6PD21 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
ShbQ6PD21 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ShbQ6PD21 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ShbQ6PD21 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ShbQ6PD21 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
ShbQ6PD21 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.76■■■□□ 2.19
ShbQ6PD21 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.74■■■□□ 2.19
ShbQ6PD21 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ShbQ6PD21 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ShbQ6PD21 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.72■■■□□ 2.19
ShbQ6PD21 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
ShbQ6PD21 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ShbQ6PD21 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ShbQ6PD21 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.68■■■□□ 2.18
ShbQ6PD21 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.67■■■□□ 2.18
ShbQ6PD21 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ShbQ6PD21 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
ShbQ6PD21 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.64■■■□□ 2.18
ShbQ6PD21 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.64■■■□□ 2.18
ShbQ6PD21 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
ShbQ6PD21 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ShbQ6PD21 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ShbQ6PD21 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
ShbQ6PD21 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.62■■■□□ 2.17
ShbQ6PD21 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ShbQ6PD21 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.61■■■□□ 2.17
ShbQ6PD21 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ShbQ6PD21 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
ShbQ6PD21 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ShbQ6PD21 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ShbQ6PD21 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.57■■■□□ 2.16
ShbQ6PD21 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.56■■■□□ 2.16
ShbQ6PD21 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
ShbQ6PD21 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ShbQ6PD21 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ShbQ6PD21 Gm7432-201ENSMUST00000210343 879 ntBASIC28.53■■■□□ 2.16
ShbQ6PD21 Nkain2-201ENSMUST00000092602 558 ntBASIC28.52■■■□□ 2.16
ShbQ6PD21 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ShbQ6PD21 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ShbQ6PD21 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
ShbQ6PD21 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
ShbQ6PD21 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ShbQ6PD21 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ShbQ6PD21 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
ShbQ6PD21 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
ShbQ6PD21 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
ShbQ6PD21 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
ShbQ6PD21 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ShbQ6PD21 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ShbQ6PD21 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
ShbQ6PD21 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
ShbQ6PD21 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
ShbQ6PD21 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ShbQ6PD21 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.42■■■□□ 2.14
ShbQ6PD21 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ShbQ6PD21 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ShbQ6PD21 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
ShbQ6PD21 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.4■■■□□ 2.14
ShbQ6PD21 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
ShbQ6PD21 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
ShbQ6PD21 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
ShbQ6PD21 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.38■■■□□ 2.13
ShbQ6PD21 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ShbQ6PD21 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ShbQ6PD21 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ShbQ6PD21 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
ShbQ6PD21 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ShbQ6PD21 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ShbQ6PD21 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.35■■■□□ 2.13
ShbQ6PD21 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
ShbQ6PD21 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.34■■■□□ 2.13
ShbQ6PD21 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ShbQ6PD21 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
ShbQ6PD21 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ShbQ6PD21 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ShbQ6PD21 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ShbQ6PD21 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ShbQ6PD21 Gm11599-201ENSMUST00000118720 878 ntBASIC28.28■■■□□ 2.12
ShbQ6PD21 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ShbQ6PD21 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ShbQ6PD21 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ShbQ6PD21 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms