Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 GLR1YPL091W 1452 nt10.67□□□□□ -0.7
RPA49Q01080 PRO1YDR300C 1287 nt10.66□□□□□ -0.7
RPA49Q01080 TOM6YOR045W 186 nt10.66□□□□□ -0.7
RPA49Q01080 DPS1YLL018C 1674 nt10.66□□□□□ -0.7
RPA49Q01080 ARP6YLR085C 1317 nt10.65□□□□□ -0.7
RPA49Q01080 BMT6YLR063W 1098 nt10.64□□□□□ -0.71
RPA49Q01080 YML089CYML089C 369 nt10.64□□□□□ -0.71
RPA49Q01080 RPL4BYDR012W 1089 nt10.62□□□□□ -0.71
RPA49Q01080 CLB6YGR109C 1143 nt10.62□□□□□ -0.71
RPA49Q01080 RPL4AYBR031W 1089 nt10.62□□□□□ -0.71
RPA49Q01080 ATG15YCR068W 1563 nt10.61□□□□□ -0.71
RPA49Q01080 PEX2YJL210W 816 nt10.61□□□□□ -0.71
RPA49Q01080 YMR244WYMR244W 1068 nt10.61□□□□□ -0.71
RPA49Q01080 PLB1YMR008C 1995 nt10.61□□□□□ -0.71
RPA49Q01080 GAP1YKR039W 1809 nt10.58□□□□□ -0.72
RPA49Q01080 UTH1YKR042W 1098 nt10.57□□□□□ -0.72
RPA49Q01080 HIP1YGR191W 1812 nt10.56□□□□□ -0.72
RPA49Q01080 RPS14BYJL191W 417 nt10.54□□□□□ -0.72
RPA49Q01080 AAC1YMR056C 930 nt10.54□□□□□ -0.72
RPA49Q01080 NRT1YOR071C 1797 nt10.52□□□□□ -0.72
RPA49Q01080 TIF6YPR016C 738 nt10.52□□□□□ -0.73
RPA49Q01080 SNF1YDR477W 1902 nt10.52□□□□□ -0.73
RPA49Q01080 MET28YIR017C 564 nt10.51□□□□□ -0.73
RPA49Q01080 IRC24YIR036C 792 nt10.51□□□□□ -0.73
RPA49Q01080 SDH5YOL071W 489 nt10.51□□□□□ -0.73
RPA49Q01080 UTR1YJR049C 1593 nt10.45□□□□□ -0.74
RPA49Q01080 YLR111WYLR111W 333 nt10.45□□□□□ -0.74
RPA49Q01080 YMR226CYMR226C 804 nt10.44□□□□□ -0.74
RPA49Q01080 ALG12YNR030W 1656 nt10.44□□□□□ -0.74
RPA49Q01080 RBG2YGR173W 1107 nt10.43□□□□□ -0.74
RPA49Q01080 TSC10YBR265W 963 nt10.43□□□□□ -0.74
RPA49Q01080 DIF1YLR437C 402 nt10.4□□□□□ -0.74
RPA49Q01080 FIT3YOR383C 615 nt10.4□□□□□ -0.74
RPA49Q01080 BIO5YNR056C 1686 nt10.39□□□□□ -0.75
RPA49Q01080 YGR012WYGR012W 1182 nt10.38□□□□□ -0.75
RPA49Q01080 SAM35YHR083W 990 nt10.38□□□□□ -0.75
RPA49Q01080 RAD23YEL037C 1197 nt10.37□□□□□ -0.75
RPA49Q01080 PRM5YIL117C 957 nt10.37□□□□□ -0.75
RPA49Q01080 YAR028WYAR028W 705 nt10.35□□□□□ -0.75
RPA49Q01080 YLR279WYLR279W 390 nt10.33□□□□□ -0.76
RPA49Q01080 ALP1YNL270C 1722 nt10.3□□□□□ -0.76
RPA49Q01080 MTG2YHR168W 1557 nt10.29□□□□□ -0.76
RPA49Q01080 AKR2YOR034C 2250 nt10.28□□□□□ -0.76
RPA49Q01080 ALD4YOR374W 1560 nt10.27□□□□□ -0.76
RPA49Q01080 ZTA1YBR046C 1005 nt10.27□□□□□ -0.77
RPA49Q01080 MSB4YOL112W 1479 nt10.27□□□□□ -0.77
RPA49Q01080 UME6YDR207C 2511 nt10.26□□□□□ -0.77
RPA49Q01080 RIB3YDR487C 627 nt10.25□□□□□ -0.77
RPA49Q01080 YPL222C-AYPL222C-A 246 nt10.25□□□□□ -0.77
RPA49Q01080 CAB5YDR196C 726 nt10.23□□□□□ -0.77
RPA49Q01080 HIF1YLL022C 1158 nt10.23□□□□□ -0.77
RPA49Q01080 YLR437C-AYLR437C-A 228 nt10.23□□□□□ -0.77
RPA49Q01080 SED1YDR077W 1017 nt10.22□□□□□ -0.77
RPA49Q01080 YER190C-AYER190C-A 576 nt10.22□□□□□ -0.77
RPA49Q01080 YGR296C-AYGR296C-A 576 nt10.22□□□□□ -0.77
RPA49Q01080 YML133W-AYML133W-A 576 nt10.22□□□□□ -0.77
RPA49Q01080 YNL339W-AYNL339W-A 576 nt10.22□□□□□ -0.77
RPA49Q01080 YPL283W-AYPL283W-A 576 nt10.22□□□□□ -0.77
RPA49Q01080 PBP1YGR178C 2169 nt10.21□□□□□ -0.78
RPA49Q01080 LIP1YMR298W 453 nt10.19□□□□□ -0.78
RPA49Q01080 HXT1YHR094C 1713 nt10.17□□□□□ -0.78
RPA49Q01080 DBP1YPL119C 1854 nt10.16□□□□□ -0.78
RPA49Q01080 NAR1YNL240C 1476 nt10.16□□□□□ -0.78
RPA49Q01080 SAM1YLR180W 1149 nt10.14□□□□□ -0.79
RPA49Q01080 CYT2YKL087C 675 nt10.12□□□□□ -0.79
RPA49Q01080 GND1YHR183W 1470 nt10.1□□□□□ -0.79
RPA49Q01080 MCH5YOR306C 1566 nt10.1□□□□□ -0.79
RPA49Q01080 YBL086CYBL086C 1401 nt10.09□□□□□ -0.79
RPA49Q01080 LOT5YKL183W 921 nt10.09□□□□□ -0.79
RPA49Q01080 FCY21YER060W 1587 nt10.07□□□□□ -0.8
RPA49Q01080 YPL251WYPL251W 303 nt10.07□□□□□ -0.8
RPA49Q01080 BRR1YPR057W 1026 nt10.07□□□□□ -0.8
RPA49Q01080 TOA2YKL058W 369 nt10.06□□□□□ -0.8
RPA49Q01080 SMM1YNR015W 1155 nt10.06□□□□□ -0.8
RPA49Q01080 APT2YDR441C 546 nt10.05□□□□□ -0.8
RPA49Q01080 LEU9YOR108W 1815 nt10.05□□□□□ -0.8
RPA49Q01080 UGA4YDL210W 1716 nt10.04□□□□□ -0.8
RPA49Q01080 YPI1YFR003C 468 nt10.03□□□□□ -0.8
RPA49Q01080 SHY1YGR112W 1170 nt10.03□□□□□ -0.8
RPA49Q01080 MEP3YPR138C 1470 nt10.03□□□□□ -0.8
RPA49Q01080 YMR103CYMR103C 363 nt10.02□□□□□ -0.81
RPA49Q01080 ZRT3YKL175W 1512 nt10.02□□□□□ -0.81
RPA49Q01080 PRY1YJL079C 900 nt9.99□□□□□ -0.81
RPA49Q01080 GND2YGR256W 1479 nt9.98□□□□□ -0.81
RPA49Q01080 ADH1YOL086C 1047 nt9.97□□□□□ -0.81
RPA49Q01080 LSB3YFR024C-A 1380 nt9.97□□□□□ -0.81
RPA49Q01080 TRT2tT(CGU)K 72 nt9.95□□□□□ -0.82
RPA49Q01080 URA6YKL024C 615 nt9.94□□□□□ -0.82
RPA49Q01080 YNR029CYNR029C 1290 nt9.94□□□□□ -0.82
RPA49Q01080 YJL195CYJL195C 702 nt9.93□□□□□ -0.82
RPA49Q01080 YAT1YAR035W 2064 nt9.93□□□□□ -0.82
RPA49Q01080 UFO1YML088W 2007 nt9.93□□□□□ -0.82
RPA49Q01080 SAM2YDR502C 1155 nt9.92□□□□□ -0.82
RPA49Q01080 VRG4YGL225W 1014 nt9.91□□□□□ -0.82
RPA49Q01080 RIB2YOL066C 1776 nt9.91□□□□□ -0.82
RPA49Q01080 SSN3YPL042C 1668 nt9.9□□□□□ -0.82
RPA49Q01080 FUN14YAL008W 597 nt9.9□□□□□ -0.82
RPA49Q01080 YJL067WYJL067W 351 nt9.9□□□□□ -0.82
RPA49Q01080 OYE3YPL171C 1203 nt9.9□□□□□ -0.82
RPA49Q01080 CSM1YCR086W 573 nt9.87□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms