Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Hcn1O88704 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hcn1O88704 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hcn1O88704 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hcn1O88704 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hcn1O88704 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hcn1O88704 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hcn1O88704 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hcn1O88704 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hcn1O88704 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Hcn1O88704 Zfp131-205ENSMUST00000223812 663 ntBASIC23.89■■□□□ 1.41
Hcn1O88704 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hcn1O88704 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hcn1O88704 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Hcn1O88704 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Hcn1O88704 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hcn1O88704 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Hcn1O88704 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hcn1O88704 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Hcn1O88704 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Hcn1O88704 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.84■■□□□ 1.41
Hcn1O88704 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.4
Hcn1O88704 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
Hcn1O88704 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hcn1O88704 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hcn1O88704 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hcn1O88704 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hcn1O88704 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Hcn1O88704 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Hcn1O88704 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hcn1O88704 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hcn1O88704 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hcn1O88704 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hcn1O88704 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hcn1O88704 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hcn1O88704 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hcn1O88704 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hcn1O88704 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Hcn1O88704 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Hcn1O88704 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.72■■□□□ 1.39
Hcn1O88704 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hcn1O88704 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hcn1O88704 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.68■■□□□ 1.38
Hcn1O88704 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Hcn1O88704 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.68■■□□□ 1.38
Hcn1O88704 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hcn1O88704 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.67■■□□□ 1.38
Hcn1O88704 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hcn1O88704 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.67■■□□□ 1.38
Hcn1O88704 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.67■■□□□ 1.38
Hcn1O88704 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hcn1O88704 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.66■■□□□ 1.38
Hcn1O88704 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Hcn1O88704 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Hcn1O88704 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hcn1O88704 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hcn1O88704 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Hcn1O88704 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Hcn1O88704 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hcn1O88704 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hcn1O88704 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hcn1O88704 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
Hcn1O88704 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Hcn1O88704 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hcn1O88704 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Hcn1O88704 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Hcn1O88704 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.59■■□□□ 1.37
Hcn1O88704 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Hcn1O88704 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hcn1O88704 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hcn1O88704 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Hcn1O88704 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Hcn1O88704 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hcn1O88704 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Hcn1O88704 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Hcn1O88704 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hcn1O88704 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hcn1O88704 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hcn1O88704 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hcn1O88704 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Hcn1O88704 Amer2-203ENSMUST00000225247 2662 ntBASIC23.54■■□□□ 1.36
Hcn1O88704 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hcn1O88704 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.53■■□□□ 1.36
Hcn1O88704 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Hcn1O88704 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hcn1O88704 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Hcn1O88704 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.53■■□□□ 1.36
Hcn1O88704 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hcn1O88704 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hcn1O88704 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Hcn1O88704 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.51■■□□□ 1.35
Hcn1O88704 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hcn1O88704 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Hcn1O88704 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hcn1O88704 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Hcn1O88704 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms