Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Tnfrsf17O88472 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tnfrsf17O88472 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.37■■□□□ 1.49
Tnfrsf17O88472 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.37■■□□□ 1.49
Tnfrsf17O88472 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tnfrsf17O88472 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tnfrsf17O88472 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.33■■□□□ 1.49
Tnfrsf17O88472 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.33■■□□□ 1.49
Tnfrsf17O88472 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Tnfrsf17O88472 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
Tnfrsf17O88472 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Tnfrsf17O88472 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tnfrsf17O88472 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tnfrsf17O88472 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.31■■□□□ 1.48
Tnfrsf17O88472 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Tnfrsf17O88472 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tnfrsf17O88472 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
Tnfrsf17O88472 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.3■■□□□ 1.48
Tnfrsf17O88472 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.29■■□□□ 1.48
Tnfrsf17O88472 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Tnfrsf17O88472 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Tnfrsf17O88472 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.26■■□□□ 1.47
Tnfrsf17O88472 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Tnfrsf17O88472 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Tnfrsf17O88472 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tnfrsf17O88472 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Tnfrsf17O88472 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Tnfrsf17O88472 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tnfrsf17O88472 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Tnfrsf17O88472 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Tnfrsf17O88472 Gm7432-201ENSMUST00000210343 879 ntBASIC24.2■■□□□ 1.46
Tnfrsf17O88472 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Tnfrsf17O88472 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Tnfrsf17O88472 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tnfrsf17O88472 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tnfrsf17O88472 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Tnfrsf17O88472 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.16■■□□□ 1.46
Tnfrsf17O88472 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.15■■□□□ 1.46
Tnfrsf17O88472 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.15■■□□□ 1.46
Tnfrsf17O88472 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.13■■□□□ 1.45
Tnfrsf17O88472 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.13■■□□□ 1.45
Tnfrsf17O88472 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tnfrsf17O88472 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tnfrsf17O88472 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Tnfrsf17O88472 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tnfrsf17O88472 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tnfrsf17O88472 Mir6538-201ENSMUST00000183713 110 ntBASIC24.08■■□□□ 1.45
Tnfrsf17O88472 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Tnfrsf17O88472 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tnfrsf17O88472 Nkain2-201ENSMUST00000092602 558 ntBASIC24.07■■□□□ 1.44
Tnfrsf17O88472 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Tnfrsf17O88472 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tnfrsf17O88472 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.03■■□□□ 1.44
Tnfrsf17O88472 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Tnfrsf17O88472 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Tnfrsf17O88472 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tnfrsf17O88472 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24■■□□□ 1.43
Tnfrsf17O88472 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tnfrsf17O88472 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.99■■□□□ 1.43
Tnfrsf17O88472 Gm11175-201ENSMUST00000116172 543 ntBASIC23.99■■□□□ 1.43
Tnfrsf17O88472 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Tnfrsf17O88472 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tnfrsf17O88472 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tnfrsf17O88472 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.98■■□□□ 1.43
Tnfrsf17O88472 Gm11599-201ENSMUST00000118720 878 ntBASIC23.97■■□□□ 1.43
Tnfrsf17O88472 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Tnfrsf17O88472 Cap2-205ENSMUST00000225824 1634 ntBASIC23.96■■□□□ 1.43
Tnfrsf17O88472 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tnfrsf17O88472 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tnfrsf17O88472 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.94■■□□□ 1.42
Tnfrsf17O88472 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tnfrsf17O88472 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tnfrsf17O88472 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tnfrsf17O88472 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.92■■□□□ 1.42
Tnfrsf17O88472 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Tnfrsf17O88472 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tnfrsf17O88472 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
Tnfrsf17O88472 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.89■■□□□ 1.41
Tnfrsf17O88472 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tnfrsf17O88472 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tnfrsf17O88472 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Tnfrsf17O88472 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.84■■□□□ 1.41
Tnfrsf17O88472 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Tnfrsf17O88472 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.84■■□□□ 1.41
Tnfrsf17O88472 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tnfrsf17O88472 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tnfrsf17O88472 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Tnfrsf17O88472 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Tnfrsf17O88472 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tnfrsf17O88472 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Tnfrsf17O88472 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tnfrsf17O88472 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tnfrsf17O88472 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tnfrsf17O88472 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Tnfrsf17O88472 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Tnfrsf17O88472 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tnfrsf17O88472 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tnfrsf17O88472 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tnfrsf17O88472 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tnfrsf17O88472 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms