Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav23A0A0G2JG17 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav23A0A0G2JG17 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trav23A0A0G2JG17 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trav23A0A0G2JG17 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav23A0A0G2JG17 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav23A0A0G2JG17 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav23A0A0G2JG17 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Trav23A0A0G2JG17 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.4■□□□□ 0.86
Trav23A0A0G2JG17 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav23A0A0G2JG17 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav23A0A0G2JG17 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav23A0A0G2JG17 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav23A0A0G2JG17 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav23A0A0G2JG17 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trav23A0A0G2JG17 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav23A0A0G2JG17 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Trav23A0A0G2JG17 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav23A0A0G2JG17 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav23A0A0G2JG17 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav23A0A0G2JG17 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav23A0A0G2JG17 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.33■□□□□ 0.85
Trav23A0A0G2JG17 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.33■□□□□ 0.84
Trav23A0A0G2JG17 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav23A0A0G2JG17 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav23A0A0G2JG17 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav23A0A0G2JG17 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav23A0A0G2JG17 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav23A0A0G2JG17 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav23A0A0G2JG17 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav23A0A0G2JG17 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav23A0A0G2JG17 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trav23A0A0G2JG17 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav23A0A0G2JG17 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.27■□□□□ 0.84
Trav23A0A0G2JG17 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav23A0A0G2JG17 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav23A0A0G2JG17 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trav23A0A0G2JG17 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav23A0A0G2JG17 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav23A0A0G2JG17 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav23A0A0G2JG17 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav23A0A0G2JG17 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav23A0A0G2JG17 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav23A0A0G2JG17 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav23A0A0G2JG17 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav23A0A0G2JG17 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav23A0A0G2JG17 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav23A0A0G2JG17 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav23A0A0G2JG17 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav23A0A0G2JG17 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav23A0A0G2JG17 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav23A0A0G2JG17 Gm45855-201ENSMUST00000212546 880 ntBASIC20.16■□□□□ 0.82
Trav23A0A0G2JG17 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav23A0A0G2JG17 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav23A0A0G2JG17 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav23A0A0G2JG17 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trav23A0A0G2JG17 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav23A0A0G2JG17 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav23A0A0G2JG17 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Trav23A0A0G2JG17 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Trav23A0A0G2JG17 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trav23A0A0G2JG17 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav23A0A0G2JG17 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav23A0A0G2JG17 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 Gm9397-201ENSMUST00000200125 605 ntBASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Trav23A0A0G2JG17 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Trav23A0A0G2JG17 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav23A0A0G2JG17 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav23A0A0G2JG17 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav23A0A0G2JG17 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav23A0A0G2JG17 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav23A0A0G2JG17 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms