Protein–RNA interactions for Protein: A0A0B4J1I0

Igkv1-110, Immunoglobulin kappa variable 1-110 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-110A0A0B4J1I0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Gm27322-201ENSMUST00000184007 104 ntBASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.04■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.04■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.99■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Igkv1-110A0A0B4J1I0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-110A0A0B4J1I0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-110A0A0B4J1I0 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.95■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.94■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Gm26115-201ENSMUST00000175605 87 ntBASIC15.93■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Igkv1-110A0A0B4J1I0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Gm8109-201ENSMUST00000194076 746 ntBASIC15.86■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Igkv1-110A0A0B4J1I0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.81■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.8■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv1-110A0A0B4J1I0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv1-110A0A0B4J1I0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms