Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 CAMK1G-201ENST00000009105 2612 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 OR2H2-201ENST00000383640 1514 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SLC1A1P43005 ELOA2-201ENST00000332567 3050 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SLC1A1P43005 HLA-DQB1-203ENST00000399082 1219 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC12.79□□□□□ -0.36
SLC1A1P43005 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 HLA-DRB6-202ENST00000437183 1090 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 PEBP1P3-201ENST00000455475 548 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 RPL3P9-201ENST00000463217 1183 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 TADA2B-205ENST00000515646 3818 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 HDAC2-AS2-215ENST00000522697 786 ntTSL 3 BASIC12.79□□□□□ -0.36
SLC1A1P43005 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 ABHD17C-205ENST00000560609 627 ntTSL 4 BASIC12.79□□□□□ -0.36
SLC1A1P43005 MIR3177-201ENST00000578255 82 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 HNRNPA1P11-201ENST00000580106 956 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 AC008750.6-201ENST00000598746 322 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 RIN1-208ENST00000627248 243 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 AL606970.1-201ENST00000445442 2559 ntTSL 3 BASIC12.79□□□□□ -0.36
SLC1A1P43005 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 LSINCT5-201ENST00000626215 2647 ntBASIC12.79□□□□□ -0.36
SLC1A1P43005 CENPO-206ENST00000473706 4272 ntTSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 RABEPK-203ENST00000373544 2450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 PIPSL-202ENST00000489875 2733 ntBASIC12.78□□□□□ -0.36
SLC1A1P43005 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 CXorf56-201ENST00000320339 2372 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 IRF5-203ENST00000402030 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 WASH2P-201ENST00000453662 1684 ntBASIC12.78□□□□□ -0.36
SLC1A1P43005 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC12.78□□□□□ -0.36
SLC1A1P43005 NAA10-205ENST00000393712 908 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 YY1P2-201ENST00000438766 948 ntBASIC12.78□□□□□ -0.36
SLC1A1P43005 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 TCL6-204ENST00000460130 911 ntTSL 3 BASIC12.78□□□□□ -0.36
SLC1A1P43005 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 BCRP4-201ENST00000506079 804 ntBASIC12.78□□□□□ -0.36
SLC1A1P43005 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 AP002512.2-201ENST00000532561 623 ntBASIC12.78□□□□□ -0.36
SLC1A1P43005 MAX-216ENST00000556979 615 ntTSL 3 BASIC12.78□□□□□ -0.36
SLC1A1P43005 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 AC025580.2-203ENST00000560647 702 ntTSL 3 BASIC12.78□□□□□ -0.36
SLC1A1P43005 AC011472.2-201ENST00000586356 655 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 AC005746.3-201ENST00000614751 393 ntBASIC12.78□□□□□ -0.36
SLC1A1P43005 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC1A1P43005 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 AP000533.2-201ENST00000417863 2260 ntBASIC12.78□□□□□ -0.36
SLC1A1P43005 RBMY1F-202ENST00000454978 1810 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 CRNN-201ENST00000271835 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 CPLX4-201ENST00000299721 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC1A1P43005 ZNF772-209ENST00000615214 1506 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC1A1P43005 AC046185.1-201ENST00000580553 2128 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SLC1A1P43005 FCRL1-201ENST00000358292 2778 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
SLC1A1P43005 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SLC1A1P43005 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SLC1A1P43005 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC1A1P43005 TPM3-202ENST00000302206 741 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC1A1P43005 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms