Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC12.9□□□□□ -0.34
MCF2LO15068 AL358933.1-201ENST00000565046 2830 ntBASIC12.9□□□□□ -0.34
MCF2LO15068 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MCF2LO15068 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
MCF2LO15068 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MCF2LO15068 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MCF2LO15068 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 ZNF221-202ENST00000587682 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 PCDHA9-201ENST00000378122 6900 ntBASIC12.89□□□□□ -0.35
MCF2LO15068 AC019294.1-202ENST00000566174 2071 ntBASIC12.89□□□□□ -0.35
MCF2LO15068 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
MCF2LO15068 C10orf71-AS1-201ENST00000437677 753 ntTSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 AL137077.1-201ENST00000442115 528 ntBASIC12.89□□□□□ -0.35
MCF2LO15068 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC12.89□□□□□ -0.35
MCF2LO15068 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC12.89□□□□□ -0.35
MCF2LO15068 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 AL606834.1-201ENST00000553836 1169 ntBASIC12.89□□□□□ -0.35
MCF2LO15068 AC090844.3-201ENST00000583462 784 ntTSL 3 BASIC12.89□□□□□ -0.35
MCF2LO15068 CHMP2A-206ENST00000600118 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 AL078624.1-201ENST00000604004 547 ntBASIC12.89□□□□□ -0.35
MCF2LO15068 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC12.89□□□□□ -0.35
MCF2LO15068 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC12.89□□□□□ -0.35
MCF2LO15068 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 OR10H1-202ENST00000641419 4376 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
MCF2LO15068 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 AC100868.1-201ENST00000262283 2413 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MCF2LO15068 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MCF2LO15068 PLXDC1-206ENST00000444911 2082 ntTSL 2 BASIC12.89□□□□□ -0.35
MCF2LO15068 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 BCAR3-203ENST00000370244 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
MCF2LO15068 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MCF2LO15068 AL021408.2-201ENST00000624196 1544 ntBASIC12.88□□□□□ -0.35
MCF2LO15068 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC12.88□□□□□ -0.35
MCF2LO15068 CELF2-210ENST00000631816 1803 ntTSL 2 BASIC12.88□□□□□ -0.35
MCF2LO15068 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 CHST9-201ENST00000580774 2033 ntTSL 3 BASIC12.88□□□□□ -0.35
MCF2LO15068 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
MCF2LO15068 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MCF2LO15068 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC12.88□□□□□ -0.35
MCF2LO15068 CLPSL1-201ENST00000373861 602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MCF2LO15068 GSTM2P1-201ENST00000405166 654 ntBASIC12.88□□□□□ -0.35
MCF2LO15068 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
MCF2LO15068 TMEM256P1-201ENST00000430550 340 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms