Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC11.29□□□□□ -0.6
P04436 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 AL078590.2-201ENST00000417483 1360 ntTSL 3 BASIC11.29□□□□□ -0.6
P04436 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
P04436 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
P04436 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC11.29□□□□□ -0.6
P04436 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04436 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 BAHD1-201ENST00000416165 4526 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC11.29□□□□□ -0.6
P04436 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04436 LINC00339-201ENST00000404210 1189 ntBASIC11.29□□□□□ -0.6
P04436 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC11.29□□□□□ -0.6
P04436 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC11.29□□□□□ -0.6
P04436 RN7SL43P-201ENST00000463926 291 ntBASIC11.29□□□□□ -0.6
P04436 JPT1-208ENST00000481647 576 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC11.29□□□□□ -0.6
P04436 AC105424.1-201ENST00000514583 209 ntBASIC11.29□□□□□ -0.6
P04436 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC11.29□□□□□ -0.6
P04436 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC11.29□□□□□ -0.6
P04436 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC11.29□□□□□ -0.6
P04436 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC11.29□□□□□ -0.6
P04436 AC015853.2-201ENST00000571282 493 ntTSL 4 BASIC11.29□□□□□ -0.6
P04436 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC11.29□□□□□ -0.6
P04436 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
P04436 AC092120.3-201ENST00000605168 568 ntBASIC11.29□□□□□ -0.6
P04436 AC127002.1-201ENST00000619123 455 ntBASIC11.29□□□□□ -0.6
P04436 AC015912.3-201ENST00000619432 348 ntBASIC11.29□□□□□ -0.6
P04436 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC11.29□□□□□ -0.6
P04436 HIST1H2APS4-202ENST00000635537 681 ntBASIC11.29□□□□□ -0.6
P04436 LINC00339-213ENST00000642137 222 ntBASIC11.29□□□□□ -0.6
P04436 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04436 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 CTAGE7P-201ENST00000435712 2436 ntBASIC11.29□□□□□ -0.6
P04436 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.29□□□□□ -0.6
P04436 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
P04436 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.29□□□□□ -0.6
P04436 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC11.29□□□□□ -0.6
P04436 AC122688.3-201ENST00000623804 3467 ntBASIC11.29□□□□□ -0.6
P04436 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC11.29□□□□□ -0.6
P04436 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04436 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
P04436 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P04436 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
P04436 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC11.28□□□□□ -0.6
P04436 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
P04436 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC11.28□□□□□ -0.6
P04436 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
P04436 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P04436 AL021407.3-201ENST00000407522 486 ntBASIC11.28□□□□□ -0.6
P04436 RBM14-203ENST00000409372 876 ntTSL 2 BASIC11.28□□□□□ -0.6
P04436 ART2P-201ENST00000415521 822 ntBASIC11.28□□□□□ -0.6
P04436 AC253536.2-201ENST00000423307 254 ntBASIC11.28□□□□□ -0.6
P04436 ACTG1P10-201ENST00000428275 1082 ntBASIC11.28□□□□□ -0.6
P04436 AC005838.1-201ENST00000430712 233 ntBASIC11.28□□□□□ -0.6
P04436 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC11.28□□□□□ -0.6
P04436 AC104117.4-201ENST00000521486 847 ntBASIC11.28□□□□□ -0.6
P04436 AP002512.2-201ENST00000532561 623 ntBASIC11.28□□□□□ -0.6
P04436 AC009086.1-201ENST00000567219 309 ntBASIC11.28□□□□□ -0.6
P04436 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC11.28□□□□□ -0.6
P04436 AC103810.4-201ENST00000578601 257 ntBASIC11.28□□□□□ -0.6
P04436 PPY-202ENST00000587006 431 ntTSL 3 BASIC11.28□□□□□ -0.6
P04436 SARS2-211ENST00000598831 665 ntTSL 5 BASIC11.28□□□□□ -0.6
P04436 AC018755.1-201ENST00000601315 1182 ntBASIC11.28□□□□□ -0.6
P04436 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC11.28□□□□□ -0.6
P04436 MIR6165-201ENST00000614803 84 ntBASIC11.28□□□□□ -0.6
P04436 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms