Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZC3H4Q9UPT8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
ZC3H4Q9UPT8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.51■■□□□ 1.83
ZC3H4Q9UPT8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 CYP2T1P-201ENST00000432607 1285 ntBASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 AC142381.4-202ENST00000563973 229 ntBASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.5■■□□□ 1.83
ZC3H4Q9UPT8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 AL158047.1-201ENST00000445918 881 ntBASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 OR10C1-204ENST00000622521 1039 ntBASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.49■■□□□ 1.83
ZC3H4Q9UPT8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
ZC3H4Q9UPT8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 AC007322.4-201ENST00000509611 723 ntBASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 AC083880.1-201ENST00000608266 535 ntBASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 MYC-209ENST00000641252 345 ntBASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZC3H4Q9UPT8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ZC3H4Q9UPT8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
ZC3H4Q9UPT8 AL512625.2-201ENST00000417533 625 ntBASIC26.45■■□□□ 1.83
ZC3H4Q9UPT8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
ZC3H4Q9UPT8 AC010141.2-201ENST00000452426 721 ntBASIC26.45■■□□□ 1.83
ZC3H4Q9UPT8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
ZC3H4Q9UPT8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ZC3H4Q9UPT8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ZC3H4Q9UPT8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
ZC3H4Q9UPT8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 UNC93B4-201ENST00000505679 747 ntBASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 AC006058.3-201ENST00000606217 1069 ntBASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 AC068338.2-201ENST00000563278 1430 ntBASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.44■■□□□ 1.82
ZC3H4Q9UPT8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 AC128676.1-201ENST00000454392 318 ntBASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms