Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
RIMBP3Q9UFD9 KRT18P20-201ENST00000548986 1279 ntBASIC35.31■■■■□ 3.24
RIMBP3Q9UFD9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC35.31■■■■□ 3.24
RIMBP3Q9UFD9 AC012306.2-201ENST00000609350 630 ntBASIC35.31■■■■□ 3.24
RIMBP3Q9UFD9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC35.31■■■■□ 3.24
RIMBP3Q9UFD9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
RIMBP3Q9UFD9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC35.3■■■■□ 3.24
RIMBP3Q9UFD9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC35.3■■■■□ 3.24
RIMBP3Q9UFD9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 ABCB10P1-201ENST00000614297 2181 ntBASIC35.29■■■■□ 3.24
RIMBP3Q9UFD9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 C1QBPP2-201ENST00000528754 825 ntBASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 AC068587.7-201ENST00000641602 218 ntBASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC35.28■■■■□ 3.24
RIMBP3Q9UFD9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 AC010501.1-201ENST00000606270 1962 ntBASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 AC133561.5-201ENST00000635547 218 ntBASIC35.27■■■■□ 3.24
RIMBP3Q9UFD9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.24
RIMBP3Q9UFD9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
RIMBP3Q9UFD9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
RIMBP3Q9UFD9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.24
RIMBP3Q9UFD9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC35.26■■■■□ 3.24
RIMBP3Q9UFD9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC35.26■■■■□ 3.24
RIMBP3Q9UFD9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 AC087499.1-201ENST00000418141 1075 ntBASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 TERF1P5-201ENST00000477545 1207 ntBASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 RN7SL850P-201ENST00000579959 291 ntBASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 AC069236.1-201ENST00000604339 616 ntBASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
RIMBP3Q9UFD9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 AC010141.3-201ENST00000456659 717 ntBASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
RIMBP3Q9UFD9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
RIMBP3Q9UFD9 CYP2T3P-201ENST00000601990 817 ntBASIC35.23■■■■□ 3.23
RIMBP3Q9UFD9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
RIMBP3Q9UFD9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 AC097493.4-201ENST00000641197 219 ntBASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
RIMBP3Q9UFD9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
RIMBP3Q9UFD9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC35.21■■■■□ 3.23
RIMBP3Q9UFD9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC35.21■■■■□ 3.23
RIMBP3Q9UFD9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
RIMBP3Q9UFD9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
RIMBP3Q9UFD9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC35.2■■■■□ 3.23
RIMBP3Q9UFD9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
RIMBP3Q9UFD9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
RIMBP3Q9UFD9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
RIMBP3Q9UFD9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC35.2■■■■□ 3.23
RIMBP3Q9UFD9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
RIMBP3Q9UFD9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC35.19■■■■□ 3.22
RIMBP3Q9UFD9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
RIMBP3Q9UFD9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
RIMBP3Q9UFD9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC35.19■■■■□ 3.22
RIMBP3Q9UFD9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC35.19■■■■□ 3.22
RIMBP3Q9UFD9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC35.19■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms