Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN1Q9P244 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRFN1Q9P244 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN1Q9P244 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN1Q9P244 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN1Q9P244 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN1Q9P244 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.89■□□□□ 0.77
LRFN1Q9P244 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN1Q9P244 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN1Q9P244 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN1Q9P244 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN1Q9P244 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 AC004911.1-201ENST00000416316 871 ntBASIC19.88■□□□□ 0.77
LRFN1Q9P244 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN1Q9P244 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN1Q9P244 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN1Q9P244 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
LRFN1Q9P244 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LRFN1Q9P244 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN1Q9P244 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN1Q9P244 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN1Q9P244 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.87■□□□□ 0.77
LRFN1Q9P244 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.87■□□□□ 0.77
LRFN1Q9P244 RARRES2P11-201ENST00000635158 484 ntBASIC19.87■□□□□ 0.77
LRFN1Q9P244 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN1Q9P244 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN1Q9P244 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN1Q9P244 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN1Q9P244 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN1Q9P244 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN1Q9P244 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.86■□□□□ 0.77
LRFN1Q9P244 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN1Q9P244 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN1Q9P244 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.85■□□□□ 0.77
LRFN1Q9P244 AC079089.2-201ENST00000531211 1277 ntBASIC19.85■□□□□ 0.77
LRFN1Q9P244 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN1Q9P244 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.85■□□□□ 0.77
LRFN1Q9P244 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LRFN1Q9P244 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN1Q9P244 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN1Q9P244 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN1Q9P244 AP004607.4-201ENST00000530158 1459 ntBASIC19.85■□□□□ 0.77
LRFN1Q9P244 AC009237.3-201ENST00000393279 1427 ntBASIC19.85■□□□□ 0.77
LRFN1Q9P244 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRFN1Q9P244 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRFN1Q9P244 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.84■□□□□ 0.77
LRFN1Q9P244 AC079140.4-201ENST00000507448 529 ntBASIC19.84■□□□□ 0.77
LRFN1Q9P244 AC090192.1-201ENST00000517740 490 ntBASIC19.84■□□□□ 0.77
LRFN1Q9P244 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 AC004854.2-201ENST00000608450 1441 ntBASIC19.84■□□□□ 0.77
LRFN1Q9P244 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRFN1Q9P244 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRFN1Q9P244 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRFN1Q9P244 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.83■□□□□ 0.77
LRFN1Q9P244 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRFN1Q9P244 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.83■□□□□ 0.77
LRFN1Q9P244 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.83■□□□□ 0.77
LRFN1Q9P244 AC016769.1-201ENST00000409132 1010 ntBASIC19.83■□□□□ 0.77
LRFN1Q9P244 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.83■□□□□ 0.77
LRFN1Q9P244 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.83■□□□□ 0.77
LRFN1Q9P244 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.83■□□□□ 0.77
LRFN1Q9P244 KRT18P61-201ENST00000585825 1298 ntBASIC19.83■□□□□ 0.77
LRFN1Q9P244 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms