Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
VPS16Q9H269 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS16Q9H269 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.79■■□□□ 1.4
VPS16Q9H269 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS16Q9H269 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS16Q9H269 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS16Q9H269 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.78■■□□□ 1.4
VPS16Q9H269 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS16Q9H269 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS16Q9H269 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
VPS16Q9H269 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
VPS16Q9H269 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS16Q9H269 AC006455.2-201ENST00000429931 906 ntBASIC23.78■■□□□ 1.4
VPS16Q9H269 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS16Q9H269 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS16Q9H269 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS16Q9H269 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
VPS16Q9H269 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS16Q9H269 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS16Q9H269 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS16Q9H269 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS16Q9H269 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS16Q9H269 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.77■■□□□ 1.4
VPS16Q9H269 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS16Q9H269 KRT16P3-201ENST00000439127 1283 ntBASIC23.77■■□□□ 1.4
VPS16Q9H269 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.77■■□□□ 1.4
VPS16Q9H269 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.77■■□□□ 1.4
VPS16Q9H269 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.77■■□□□ 1.4
VPS16Q9H269 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS16Q9H269 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS16Q9H269 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.77■■□□□ 1.4
VPS16Q9H269 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
VPS16Q9H269 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS16Q9H269 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.76■■□□□ 1.39
VPS16Q9H269 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS16Q9H269 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS16Q9H269 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS16Q9H269 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS16Q9H269 AC241377.3-202ENST00000626088 1088 ntBASIC23.76■■□□□ 1.39
VPS16Q9H269 AC241585.3-202ENST00000628937 1088 ntBASIC23.76■■□□□ 1.39
VPS16Q9H269 AC245100.8-202ENST00000629247 1058 ntBASIC23.76■■□□□ 1.39
VPS16Q9H269 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS16Q9H269 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS16Q9H269 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS16Q9H269 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS16Q9H269 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 AC133637.1-201ENST00000624115 1537 ntBASIC23.75■■□□□ 1.39
VPS16Q9H269 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 pRNA.6-201ENST00000610482 90 ntBASIC23.75■■□□□ 1.39
VPS16Q9H269 pRNA.5-201ENST00000612139 90 ntBASIC23.75■■□□□ 1.39
VPS16Q9H269 pRNA.11-201ENST00000618423 90 ntBASIC23.75■■□□□ 1.39
VPS16Q9H269 pRNA.13-201ENST00000619112 90 ntBASIC23.75■■□□□ 1.39
VPS16Q9H269 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.75■■□□□ 1.39
VPS16Q9H269 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.75■■□□□ 1.39
VPS16Q9H269 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
VPS16Q9H269 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS16Q9H269 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.74■■□□□ 1.39
VPS16Q9H269 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.74■■□□□ 1.39
VPS16Q9H269 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.74■■□□□ 1.39
VPS16Q9H269 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VPS16Q9H269 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.74■■□□□ 1.39
VPS16Q9H269 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
VPS16Q9H269 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
VPS16Q9H269 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VPS16Q9H269 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.74■■□□□ 1.39
VPS16Q9H269 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VPS16Q9H269 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
VPS16Q9H269 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VPS16Q9H269 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
VPS16Q9H269 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS16Q9H269 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
VPS16Q9H269 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS16Q9H269 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
VPS16Q9H269 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS16Q9H269 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
VPS16Q9H269 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.73■■□□□ 1.39
VPS16Q9H269 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.73■■□□□ 1.39
VPS16Q9H269 AC099791.2-201ENST00000605725 427 ntBASIC23.73■■□□□ 1.39
VPS16Q9H269 AL031602.1-201ENST00000633169 911 ntBASIC23.73■■□□□ 1.39
VPS16Q9H269 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS16Q9H269 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS16Q9H269 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.73■■□□□ 1.39
VPS16Q9H269 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
VPS16Q9H269 AC244015.2-201ENST00000616358 1861 ntBASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms