Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 AC079089.2-201ENST00000531211 1277 ntBASIC22.56■■□□□ 1.2
RNF38Q9H0F5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.56■■□□□ 1.2
RNF38Q9H0F5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF38Q9H0F5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF38Q9H0F5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 AC090192.1-201ENST00000517740 490 ntBASIC22.53■■□□□ 1.2
RNF38Q9H0F5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RNF38Q9H0F5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 AC005224.4-201ENST00000583262 1652 ntBASIC22.52■■□□□ 1.2
RNF38Q9H0F5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RNF38Q9H0F5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF38Q9H0F5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF38Q9H0F5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.5■■□□□ 1.19
RNF38Q9H0F5 AC087742.1-201ENST00000575880 1738 ntBASIC22.5■■□□□ 1.19
RNF38Q9H0F5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF38Q9H0F5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF38Q9H0F5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
RNF38Q9H0F5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF38Q9H0F5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RNF38Q9H0F5 LINC00526-201ENST00000581067 1875 ntBASIC22.49■■□□□ 1.19
RNF38Q9H0F5 AC009237.3-201ENST00000393279 1427 ntBASIC22.49■■□□□ 1.19
RNF38Q9H0F5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 DUSP8P5-201ENST00000422884 1815 ntBASIC22.49■■□□□ 1.19
RNF38Q9H0F5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RNF38Q9H0F5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms