Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.85■□□□□ 0.45
S1PR3Q99500 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.85■□□□□ 0.45
S1PR3Q99500 pRNA.6-201ENST00000610482 90 ntBASIC17.85■□□□□ 0.45
S1PR3Q99500 pRNA.5-201ENST00000612139 90 ntBASIC17.85■□□□□ 0.45
S1PR3Q99500 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.85■□□□□ 0.45
S1PR3Q99500 pRNA.11-201ENST00000618423 90 ntBASIC17.85■□□□□ 0.45
S1PR3Q99500 pRNA.13-201ENST00000619112 90 ntBASIC17.85■□□□□ 0.45
S1PR3Q99500 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.84■□□□□ 0.45
S1PR3Q99500 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 AC133637.1-201ENST00000624115 1537 ntBASIC17.84■□□□□ 0.45
S1PR3Q99500 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
S1PR3Q99500 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.84■□□□□ 0.45
S1PR3Q99500 AC008406.3-201ENST00000620001 1374 ntBASIC17.84■□□□□ 0.45
S1PR3Q99500 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.84■□□□□ 0.45
S1PR3Q99500 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
S1PR3Q99500 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
S1PR3Q99500 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
S1PR3Q99500 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.83■□□□□ 0.45
S1PR3Q99500 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
S1PR3Q99500 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.83■□□□□ 0.45
S1PR3Q99500 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
S1PR3Q99500 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
S1PR3Q99500 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
S1PR3Q99500 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
S1PR3Q99500 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
S1PR3Q99500 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
S1PR3Q99500 AL136116.3-201ENST00000402907 1138 ntBASIC17.83■□□□□ 0.44
S1PR3Q99500 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.83■□□□□ 0.44
S1PR3Q99500 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
S1PR3Q99500 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
S1PR3Q99500 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
S1PR3Q99500 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
S1PR3Q99500 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
S1PR3Q99500 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
S1PR3Q99500 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
S1PR3Q99500 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
S1PR3Q99500 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.82■□□□□ 0.44
S1PR3Q99500 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.82■□□□□ 0.44
S1PR3Q99500 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.82■□□□□ 0.44
S1PR3Q99500 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.82■□□□□ 0.44
S1PR3Q99500 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.82■□□□□ 0.44
S1PR3Q99500 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.82■□□□□ 0.44
S1PR3Q99500 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
S1PR3Q99500 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
S1PR3Q99500 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.81■□□□□ 0.44
S1PR3Q99500 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.81■□□□□ 0.44
S1PR3Q99500 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.81■□□□□ 0.44
S1PR3Q99500 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 AC006455.2-201ENST00000429931 906 ntBASIC17.81■□□□□ 0.44
S1PR3Q99500 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
S1PR3Q99500 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.81■□□□□ 0.44
S1PR3Q99500 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
S1PR3Q99500 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.81■□□□□ 0.44
S1PR3Q99500 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
S1PR3Q99500 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.81■□□□□ 0.44
S1PR3Q99500 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.8■□□□□ 0.44
S1PR3Q99500 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
S1PR3Q99500 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
S1PR3Q99500 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
S1PR3Q99500 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
S1PR3Q99500 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.8■□□□□ 0.44
S1PR3Q99500 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
S1PR3Q99500 CA15P2-201ENST00000611168 834 ntBASIC17.8■□□□□ 0.44
S1PR3Q99500 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
S1PR3Q99500 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.8■□□□□ 0.44
S1PR3Q99500 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.8■□□□□ 0.44
S1PR3Q99500 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.8■□□□□ 0.44
S1PR3Q99500 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
S1PR3Q99500 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
S1PR3Q99500 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
S1PR3Q99500 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
S1PR3Q99500 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
S1PR3Q99500 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
S1PR3Q99500 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.79■□□□□ 0.44
S1PR3Q99500 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms