Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 EP400NL-214ENST00000641289 2402 ntBASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 AIRN-201ENST00000601203 4374 ntBASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 AC092053.2-201ENST00000640557 1818 ntBASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2AAQ96QV6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.58
HIST1H2AAQ96QV6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H2AAQ96QV6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 AL138724.1-201ENST00000606771 1088 ntBASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2AAQ96QV6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 AC080038.3-201ENST00000623346 1952 ntBASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 MIR4466-201ENST00000606121 54 ntBASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 AC131212.1-201ENST00000613771 668 ntBASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 AC087239.1-201ENST00000622671 572 ntBASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 AC068587.7-201ENST00000641602 218 ntBASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2AAQ96QV6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 CA15P2-201ENST00000611168 834 ntBASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms