Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 AC007322.1-201ENST00000426983 750 ntBASIC21.36■■□□□ 1.01
PCDH15Q96QU1 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.36■■□□□ 1.01
PCDH15Q96QU1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH15Q96QU1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH15Q96QU1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH15Q96QU1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH15Q96QU1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH15Q96QU1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH15Q96QU1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH15Q96QU1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH15Q96QU1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH15Q96QU1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.33■■□□□ 1
PCDH15Q96QU1 OXCT2P1-201ENST00000447263 1535 ntBASIC21.33■■□□□ 1
PCDH15Q96QU1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 AF201337.1-201ENST00000520239 748 ntBASIC21.32■■□□□ 1
PCDH15Q96QU1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.32■■□□□ 1
PCDH15Q96QU1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDH15Q96QU1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 AC073210.2-201ENST00000430369 194 ntBASIC21.32■■□□□ 1
PCDH15Q96QU1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH15Q96QU1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.32■■□□□ 1
PCDH15Q96QU1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.31■■□□□ 1
PCDH15Q96QU1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH15Q96QU1 AC009237.3-201ENST00000393279 1427 ntBASIC21.31■■□□□ 1
PCDH15Q96QU1 AC093827.2-201ENST00000512654 315 ntBASIC21.31■■□□□ 1
PCDH15Q96QU1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH15Q96QU1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH15Q96QU1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDH15Q96QU1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.3■■□□□ 1
PCDH15Q96QU1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDH15Q96QU1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PCDH15Q96QU1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.3■■□□□ 1
PCDH15Q96QU1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PCDH15Q96QU1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH15Q96QU1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH15Q96QU1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH15Q96QU1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH15Q96QU1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH15Q96QU1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDH15Q96QU1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.28■■□□□ 1
PCDH15Q96QU1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDH15Q96QU1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PCDH15Q96QU1 AL353803.4-201ENST00000565882 1934 ntBASIC21.28■■□□□ 1
PCDH15Q96QU1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms