Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DUX3Q96PT4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 LINC02228-203ENST00000641970 1355 ntBASIC16.82■□□□□ 0.28
DUX3Q96PT4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 AC010141.3-201ENST00000456659 717 ntBASIC16.82■□□□□ 0.28
DUX3Q96PT4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX3Q96PT4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX3Q96PT4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX3Q96PT4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.82■□□□□ 0.28
DUX3Q96PT4 AC087239.1-201ENST00000622671 572 ntBASIC16.82■□□□□ 0.28
DUX3Q96PT4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DUX3Q96PT4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX3Q96PT4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.81■□□□□ 0.28
DUX3Q96PT4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
DUX3Q96PT4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX3Q96PT4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX3Q96PT4 AC022517.1-201ENST00000592429 346 ntBASIC16.81■□□□□ 0.28
DUX3Q96PT4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX3Q96PT4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX3Q96PT4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 DUSP8P3-201ENST00000399571 1760 ntBASIC16.8■□□□□ 0.28
DUX3Q96PT4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.8■□□□□ 0.28
DUX3Q96PT4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX3Q96PT4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DUX3Q96PT4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
DUX3Q96PT4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.79■□□□□ 0.28
DUX3Q96PT4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 NTF6G-201ENST00000591094 616 ntBASIC16.79■□□□□ 0.28
DUX3Q96PT4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
DUX3Q96PT4 AC068587.7-201ENST00000641602 218 ntBASIC16.79■□□□□ 0.28
DUX3Q96PT4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.79■□□□□ 0.28
DUX3Q96PT4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX3Q96PT4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
DUX3Q96PT4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX3Q96PT4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DUX3Q96PT4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX3Q96PT4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
DUX3Q96PT4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX3Q96PT4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX3Q96PT4 TERF1P2-201ENST00000583350 1212 ntBASIC16.78■□□□□ 0.28
DUX3Q96PT4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.78■□□□□ 0.28
DUX3Q96PT4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX3Q96PT4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX3Q96PT4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX3Q96PT4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
DUX3Q96PT4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX3Q96PT4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX3Q96PT4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DUX3Q96PT4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.77■□□□□ 0.28
DUX3Q96PT4 SMUG1P1-201ENST00000590640 811 ntBASIC16.77■□□□□ 0.28
DUX3Q96PT4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.77■□□□□ 0.28
DUX3Q96PT4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
DUX3Q96PT4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
DUX3Q96PT4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX3Q96PT4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms