Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL21A1Q96P44 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.43■□□□□ 0.86
COL21A1Q96P44 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL21A1Q96P44 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL21A1Q96P44 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 AL136162.1-201ENST00000607711 1078 ntBASIC20.42■□□□□ 0.86
COL21A1Q96P44 AC011298.3-201ENST00000615796 283 ntBASIC20.42■□□□□ 0.86
COL21A1Q96P44 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL21A1Q96P44 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
COL21A1Q96P44 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COL21A1Q96P44 C11orf96-202ENST00000528572 1834 ntBASIC20.41■□□□□ 0.86
COL21A1Q96P44 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.41■□□□□ 0.86
COL21A1Q96P44 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COL21A1Q96P44 AC133637.1-201ENST00000624115 1537 ntBASIC20.41■□□□□ 0.86
COL21A1Q96P44 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL21A1Q96P44 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COL21A1Q96P44 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL21A1Q96P44 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL21A1Q96P44 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL21A1Q96P44 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL21A1Q96P44 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL21A1Q96P44 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.4■□□□□ 0.86
COL21A1Q96P44 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.4■□□□□ 0.86
COL21A1Q96P44 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL21A1Q96P44 AC004687.1-201ENST00000579003 1625 ntBASIC20.4■□□□□ 0.86
COL21A1Q96P44 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL21A1Q96P44 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL21A1Q96P44 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.4■□□□□ 0.86
COL21A1Q96P44 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL21A1Q96P44 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
COL21A1Q96P44 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL21A1Q96P44 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL21A1Q96P44 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.39■□□□□ 0.85
COL21A1Q96P44 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.39■□□□□ 0.85
COL21A1Q96P44 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.39■□□□□ 0.85
COL21A1Q96P44 AC135279.3-201ENST00000610945 1311 ntBASIC20.39■□□□□ 0.85
COL21A1Q96P44 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
COL21A1Q96P44 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
COL21A1Q96P44 AC110285.6-201ENST00000617652 491 ntBASIC20.39■□□□□ 0.85
COL21A1Q96P44 AC136469.2-201ENST00000623944 1028 ntBASIC20.39■□□□□ 0.85
COL21A1Q96P44 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL21A1Q96P44 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL21A1Q96P44 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL21A1Q96P44 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL21A1Q96P44 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL21A1Q96P44 PBX2P1-201ENST00000493219 1291 ntBASIC20.38■□□□□ 0.85
COL21A1Q96P44 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 AC024257.2-201ENST00000549699 147 ntBASIC20.38■□□□□ 0.85
COL21A1Q96P44 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL21A1Q96P44 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL21A1Q96P44 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
COL21A1Q96P44 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL21A1Q96P44 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms