Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 RCN1P1-201ENST00000400413 996 ntBASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3BQ96NU0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 AC020928.2-201ENST00000588717 2197 ntBASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 AC026366.1-201ENST00000488803 879 ntBASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3BQ96NU0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 AC097658.1-201ENST00000475555 843 ntBASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 Z99916.2-201ENST00000604037 246 ntBASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3BQ96NU0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNTNAP3BQ96NU0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 AC093323.1-202ENST00000635031 2045 ntBASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CNTNAP3BQ96NU0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 AC133561.5-201ENST00000635547 218 ntBASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 MYC-209ENST00000641252 345 ntBASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP3BQ96NU0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 FAM197Y4-202ENST00000622692 608 ntBASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.74■□□□□ 0.91
CNTNAP3BQ96NU0 AC145676.1-201ENST00000514988 2004 ntBASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP3BQ96NU0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms