Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FEM1AP4-201ENST00000443167 1987 ntBASIC16.53■□□□□ 0.24
LINC00479Q96M42 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LINC00479Q96M42 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC00479Q96M42 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC00479Q96M42 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00479Q96M42 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00479Q96M42 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00479Q96M42 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00479Q96M42 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00479Q96M42 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LINC00479Q96M42 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LINC00479Q96M42 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LINC00479Q96M42 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.52■□□□□ 0.23
LINC00479Q96M42 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00479Q96M42 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 AC092667.1-201ENST00000434301 2586 ntBASIC16.51■□□□□ 0.23
LINC00479Q96M42 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00479Q96M42 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00479Q96M42 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LINC00479Q96M42 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 FP325331.1-202ENST00000623531 1380 ntBASIC16.49■□□□□ 0.23
LINC00479Q96M42 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00479Q96M42 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00479Q96M42 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00479Q96M42 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC00479Q96M42 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00479Q96M42 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00479Q96M42 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00479Q96M42 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LINC00479Q96M42 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00479Q96M42 RARRES2P2-201ENST00000394842 485 ntBASIC16.48■□□□□ 0.23
LINC00479Q96M42 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC00479Q96M42 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00479Q96M42 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00479Q96M42 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC00479Q96M42 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LINC00479Q96M42 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms