Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 AC012414.1-201ENST00000556676 535 ntBASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 AC087623.3-201ENST00000607047 1098 ntBASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 AC027612.3-201ENST00000413684 1047 ntBASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 AC104564.3-201ENST00000582367 638 ntBASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 AC087239.1-201ENST00000622671 572 ntBASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.38■■□□□ 1.01
SH3KBP1Q96B97 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 C1orf229-201ENST00000623686 2258 ntBASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3KBP1Q96B97 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 AC123595.1-201ENST00000440769 1046 ntBASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.36■■□□□ 1.01
SH3KBP1Q96B97 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3KBP1Q96B97 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 AC034268.1-201ENST00000441047 882 ntBASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 AC233723.2-201ENST00000623798 2106 ntBASIC21.34■■□□□ 1.01
SH3KBP1Q96B97 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 AC092666.2-201ENST00000613287 246 ntBASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 AC105233.4-201ENST00000642045 216 ntBASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3KBP1Q96B97 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SH3KBP1Q96B97 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.33■■□□□ 1
SH3KBP1Q96B97 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SH3KBP1Q96B97 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.33■■□□□ 1
SH3KBP1Q96B97 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.33■■□□□ 1
SH3KBP1Q96B97 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms