Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 RARRES2P1-201ENST00000474487 481 ntBASIC17.06■□□□□ 0.32
NPIPB3Q92617 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NPIPB3Q92617 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPB3Q92617 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NPIPB3Q92617 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NPIPB3Q92617 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPB3Q92617 AL499627.2-201ENST00000606283 725 ntBASIC17.04■□□□□ 0.32
NPIPB3Q92617 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NPIPB3Q92617 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB3Q92617 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 AC009299.2-201ENST00000482477 511 ntBASIC17.03■□□□□ 0.32
NPIPB3Q92617 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB3Q92617 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPIPB3Q92617 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NPIPB3Q92617 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB3Q92617 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB3Q92617 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
NPIPB3Q92617 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NPIPB3Q92617 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB3Q92617 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPB3Q92617 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB3Q92617 AL117332.1-201ENST00000622628 974 ntBASIC17.02■□□□□ 0.32
NPIPB3Q92617 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB3Q92617 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NPIPB3Q92617 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB3Q92617 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB3Q92617 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NPIPB3Q92617 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPB3Q92617 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB3Q92617 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPB3Q92617 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB3Q92617 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
NPIPB3Q92617 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.01■□□□□ 0.31
NPIPB3Q92617 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NPIPB3Q92617 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB3Q92617 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB3Q92617 MIR6724-1-201ENST00000616420 92 ntBASIC17.01■□□□□ 0.31
NPIPB3Q92617 MIR6724-2-201ENST00000616483 92 ntBASIC17.01■□□□□ 0.31
NPIPB3Q92617 MIR6724-4-201ENST00000617390 92 ntBASIC17.01■□□□□ 0.31
NPIPB3Q92617 MIR6724-3-201ENST00000622482 92 ntBASIC17.01■□□□□ 0.31
NPIPB3Q92617 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NPIPB3Q92617 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPB3Q92617 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms