Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
C3orf56Q8N813 AC004687.1-201ENST00000579003 1625 ntBASIC16.99■□□□□ 0.31
C3orf56Q8N813 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
C3orf56Q8N813 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C3orf56Q8N813 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C3orf56Q8N813 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C3orf56Q8N813 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
C3orf56Q8N813 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
C3orf56Q8N813 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
C3orf56Q8N813 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C3orf56Q8N813 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C3orf56Q8N813 AP001160.3-201ENST00000601484 763 ntBASIC16.98■□□□□ 0.31
C3orf56Q8N813 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.98■□□□□ 0.31
C3orf56Q8N813 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.98■□□□□ 0.31
C3orf56Q8N813 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.98■□□□□ 0.31
C3orf56Q8N813 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C3orf56Q8N813 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
C3orf56Q8N813 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.98■□□□□ 0.31
C3orf56Q8N813 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
C3orf56Q8N813 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
C3orf56Q8N813 DUSP5P2-201ENST00000426873 1033 ntBASIC16.97■□□□□ 0.31
C3orf56Q8N813 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
C3orf56Q8N813 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.97■□□□□ 0.31
C3orf56Q8N813 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C3orf56Q8N813 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.97■□□□□ 0.31
C3orf56Q8N813 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.96■□□□□ 0.31
C3orf56Q8N813 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.96■□□□□ 0.31
C3orf56Q8N813 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C3orf56Q8N813 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
C3orf56Q8N813 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C3orf56Q8N813 OXCT2P1-201ENST00000447263 1535 ntBASIC16.96■□□□□ 0.31
C3orf56Q8N813 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.96■□□□□ 0.31
C3orf56Q8N813 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C3orf56Q8N813 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.96■□□□□ 0.31
C3orf56Q8N813 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.96■□□□□ 0.31
C3orf56Q8N813 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C3orf56Q8N813 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.96■□□□□ 0.31
C3orf56Q8N813 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C3orf56Q8N813 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C3orf56Q8N813 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C3orf56Q8N813 AC009237.3-201ENST00000393279 1427 ntBASIC16.96■□□□□ 0.3
C3orf56Q8N813 AC005224.4-201ENST00000583262 1652 ntBASIC16.95■□□□□ 0.3
C3orf56Q8N813 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C3orf56Q8N813 AL158047.1-201ENST00000445918 881 ntBASIC16.95■□□□□ 0.3
C3orf56Q8N813 RPS2P4-201ENST00000476944 856 ntBASIC16.95■□□□□ 0.3
C3orf56Q8N813 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C3orf56Q8N813 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C3orf56Q8N813 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C3orf56Q8N813 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.95■□□□□ 0.3
C3orf56Q8N813 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C3orf56Q8N813 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 MKRN4P-201ENST00000444706 1521 ntBASIC16.94■□□□□ 0.3
C3orf56Q8N813 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.94■□□□□ 0.3
C3orf56Q8N813 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.93■□□□□ 0.3
C3orf56Q8N813 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 AC010536.3-201ENST00000620306 533 ntBASIC16.93■□□□□ 0.3
C3orf56Q8N813 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms